Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01445 ATGCATCAAGATCTATCTTCAAACCCTAATCCCAATTCCAATACTAAATTCAATCCAAAATCTCACAATGCAAACACCGCGTCACAGTTACCTCCACCTCCGCCATCCACGGCGGCGACAACCGCCGCCGGCAAGTCCTCATTTTCTTCCACTTCTCTATTCGCGCGCTCCGGTTCCAATGGCGGATCCCACCACCGGAGAGCCCACTCGGAGGTCAGTTTCCGATTACCAGACGACTTGATGGACCTATCTCCGTCCGATCCGTTCACCGGCGGATCGTCGACGGCGAGCTTAGATGAGATCGGATCCGAAGACGACCTGTTCTCGACGTACATTGACGTTGACAAACTCGGAGGTTCGAACGAGTTGGGAGTTGCCGGAGTAGATCCGGTCGGAAATGGTGAACCGGATAAGATTCCGGCGAGGCCGAGACATAGGCACAGTAGCTCCGTCGACGGTTGTTCTTCGTTTGGGGAGATTATGGATGGGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTTTGGTCTATTGATCCCAAACGTGCTAAGAGAATACTTGCAAATCGACAGTCTGCAGCTCGCTCAAAAGAGAGAAAGGCCCGCTATATACAAGAACTAGAGCGCAAAGTTCAGACCCTACAAACTGAAGCTACAACTCTTTCTGCCCAACTGACCCTATACCAGAGAGACACAACAGGTCTGTCGACTGAAAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAGCAACAAGCACATCTTCGTGATGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGGCTGAAAGTTGCTACTGGGAATATAATGAGCCACACCGAGTCTTTTAATCTTGGTATGCACCAAATGGCATTTACAGAACCAAGCTTCAATCCAATTCCACCACAATCAGGTCCTTCTGGTCACCAGAACATGCACTTGCCACGATTTGGTCCCTCCCCGTCTAGCATGTCAACTCATCATCTGCAACAAACACATTCTCCTTCATTTTCAGAATTATTGCAAAATGACCAGCTCGGTCGTTTTCAGGGACTCGACATTAGTAGTAAAGGAACAACTGTTGTGAAATCCGAAGACCCCTCTATTTCTGCAAGTGAGAGTAGCACTACATTTTGA 1140 0.4833 MHQDLSSNPNPNSNTKFNPKSHNANTASQLPPPPPSTAATTAAGKSSFSSTSLFARSGSNGGSHHRRAHSEVSFRLPDDLMDLSPSDPFTGGSSTASLDEIGSEDDLFSTYIDVDKLGGSNELGVAGVDPVGNGEPDKIPARPRHRHSSSVDGCSSFGEIMDGKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAHLRDALNEALKKEVERLKVATGNIMSHTESFNLGMHQMAFTEPSFNPIPPQSGPSGHQNMHLPRFGPSPSSMSTHHLQQTHSPSFSELLQNDQLGRFQGLDISSKGTTVVKSEDPSISASESSTTF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01445 379 Pfam bZIP transcription factor 181 236 IPR004827 GO:0003700|GO:0006355
Car02g01445 379 SMART brlzneu 177 241 IPR004827 GO:0003700|GO:0006355
Car02g01445 379 MobiDBLite consensus disorder prediction 39 59 - -
Car02g01445 379 Coils Coil 197 224 - -
Car02g01445 379 MobiDBLite consensus disorder prediction 125 154 - -
Car02g01445 379 MobiDBLite consensus disorder prediction 301 336 - -
Car02g01445 379 MobiDBLite consensus disorder prediction 1 70 - -
Car02g01445 379 MobiDBLite consensus disorder prediction 352 379 - -
Car02g01445 379 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 242 IPR004827 GO:0003700|GO:0006355
Car02g01445 379 PANTHER ATBZIP TRANSCRIPTION FACTOR 10 376 - -
Car02g01445 379 MobiDBLite consensus disorder prediction 304 336 - -
Car02g01445 379 Gene3D - 180 232 - -
Car02g01445 379 MobiDBLite consensus disorder prediction 1 27 - -
Car02g01445 379 CDD bZIP_plant_RF2 182 231 IPR044759 GO:0003700|GO:0006355
Car02g01445 379 SUPERFAMILY Leucine zipper domain 181 232 IPR046347 GO:0003700|GO:0006355
Car02g01445 379 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01445 Car-Chr2 41358999 41361818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01445 62 379 bZIP Transcription Factor Family AT2G40620 53.258 3.59e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car02g01445 bZIP_1 6.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01445 - - vra:106763153 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01445 02 41358999 41361818 Car02g01445 02 41358999 41361818 ECH
Car05g01394 05 58032312 58035303 Car02g01445 02 41358999 41361818 PCT