Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01440 ATGTTTTGTAAGAGAGAGAACATGGATGATTTCAAGGAAGATAATGGTTATGTGGAAATTGATCCAACTGGTCGCTATGGAAGGTTTGGAGATGTTCTTGGAAAAGGAGCAATGAAGACAGTGTACAAAGCAATTGATGAAGTCCTTGGTATAGAGGTAGCATGGAACAAGATCAGACTCAGTGAGGTACTTAACACGCAGGACGATTTGCAGCGCCTTTACTCGGAAGTTCATCTCCTAAGCACTCTCAAGCATCACTCCATCATAAGATTCTTCACATCTTGGATTGATATTGATAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACATCAGGATCATTGAGAGAATACCGAAAGAAATATAAGCGAGTAAGCGTACAAGCAATAAAGAATTGGGCGCGCCAAATCTTACAAGGACTAGTTTATTTACATGGCCATGATCCACCAGTAATTCATAGGGACCTTAAATGTGACAACATATTTGTCAATGGACATCTTGGACAAGTGAAAATTGGTGATCTTGGACTAGCTGCAATTCTTCAAGGTTCTCAATCAGCTCATAGTGTTATAGGCACGCCCGAGTTCATGGCGCCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTTTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGATTATCCATATAGTGAATGTTCTAATCCAGCACAGATTTACAAGAAAGTGACATCGGGGAGGCTACCGATGGCGTTTTTCCGCGTTGAAGATGCGGAAGCAAGGAAGTTTATTGGAAAATGTTTAGAACCTGCAGCGAAGAGACCATCGGCGAAAGATTTGTTGCTCGAACCCTTTCTTTCGGCCGATGATTCTTTGTCTGCAATGAAGCTTGCAATTCAGAAGCCATTTTTGAATGACAGTGAAATGGAAAAACTGAAATTGAGTGATGAATTTCCAAGGACTAAAATGAAAGTAATAGGGAAGTTGAATCCTGAAGATGATACTATCTTTCTCAAAGTTCAAATTTCTGATCAGAATTGTTCTGTTAGGAATGTATATTTTCCCTTTGACATTCTCACAGACACTCCCATAGATGTTGCAATGGAGATGGTAAAAGAATTGGAGATTTCTGATTGGGATCCTTTTGATATTGCAAATATGATTAATAGAGAGATATCTGCTCTGCTACCATATAGATGGCAAAATAATTATTCAGATTCCTACAACACATTCAGTTACCAAGATGACGACGGCGAAGATGAACCTCATTTTCGTCTCCGCTCGTTCTCTTCATGTTCATCGTTGCAAGAATCGATACCAGATTTAGTCAGTAAAGTTGAGGAAATATCTCGCGGATATTATTCGCTCCATGATGATTTGCATGATGATAACAGTTCAAGATGCTCTTCACAAGGGACATATTCCAATTGGAACTACTATTCTATGGATGATCAAGAACACAATAACAATGTAGCTTCTATAAGAAAAGATAAGCTTCCCATGATAAAGAACCAACAGGGCACAAGGTTTTCACCTGGTGAAGACTTGAGCAATTGCAACAAGAATCCTTCACCTAGTAATAGTAAGATGATGATGGAAAACAGAAAACTAACACGAAACAGGTCACTGATTGATACACGAAGCCAATTGTTACATAGATCATTGGTTGAGGAGTTGTACAAAAGAAGACAATTCAAAACAATTGGTGCTGTGGAGAATATTGGATTTCAGTCACCTTATGATGTTTCTACAAAATATTCATAG 1761 0.3856 MFCKRENMDDFKEDNGYVEIDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNKIRLSEVLNTQDDLQRLYSEVHLLSTLKHHSIIRFFTSWIDIDNKAFNFVTEMFTSGSLREYRKKYKRVSVQAIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGRLPMAFFRVEDAEARKFIGKCLEPAAKRPSAKDLLLEPFLSADDSLSAMKLAIQKPFLNDSEMEKLKLSDEFPRTKMKVIGKLNPEDDTIFLKVQISDQNCSVRNVYFPFDILTDTPIDVAMEMVKELEISDWDPFDIANMINREISALLPYRWQNNYSDSYNTFSYQDDDGEDEPHFRLRSFSSCSSLQESIPDLVSKVEEISRGYYSLHDDLHDDNSSRCSSQGTYSNWNYYSMDDQEHNNNVASIRKDKLPMIKNQQGTRFSPGEDLSNCNKNPSPSNSKMMMENRKLTRNRSLIDTRSQLLHRSLVEELYKRRQFKTIGAVENIGFQSPYDVSTKYS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01440 586 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 584 - -
Car02g01440 586 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Car02g01440 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Car02g01440 586 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Car02g01440 586 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01440 586 SUPERFAMILY Protein kinase-like (PK-like) 28 286 IPR011009 -
Car02g01440 586 CDD STKc_WNK 25 285 - -
Car02g01440 586 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01440 586 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01440 586 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 6 584 - -
Car02g01440 586 MobiDBLite consensus disorder prediction 506 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01440 Car-Chr2 41281362 41285803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01440 7 584 MAP Kinase Kinase Kinase AT5G58350 56.803 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car02g01440 Pkinase 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01440 K08867 - gmx:100272203 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01440 02 41281362 41285803 Car02g01440 02 41281362 41285803 ECH
Car05g01368 05 57593961 57597749 Car02g01440 02 41281362 41285803 PCT