Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01435 ATGCCGGAGACCGAACAAACGCCACAGGCGGCAGAAACCACCACCGCGCTCTTCGGAAAATACGAAGTTGGAAAACTACTAGGATGCGGCGCGTTTGCGAAAGTCTACCACGCGCGGAACACGGCGAATGGACAGAGCGTTGCTGTGAAAGTAATCAACAAGAAGAAAGTCACAGCGACGGGACTCGCCGGAAACGTGAAACGCGAAATCTCTATCATGAGTCGACTCCGTCACCCACACATCGTTAAACTCCATGAAGTTCTCGCCACCAAAACGAAAATCTATTTCATCATGGAATTCGCTAAAGGTGGTGAACTCTTCGCGAAAATCGCTAATAAAGGTCGATTCAGCGAAGATCTATCACGTCGCTACTTTCAACAGCTCATCTCCGCCGTCGGATTTTGCCACTCTCGCGGCGTCTTCCATCGTGATCTGAAACCTGAAAATCTCTTACTCGATGATAAGGGAAATTTGAAGGTTTCGGATTTTGGATTGAGTGCAATGAAAGAGCAAGTTCGGGTGGATGGTATGTTACACACGCTTTGTGGAACACCTGCTTACGTGGCACCTGAGATTTTAGCGAAGAGAGGTTATGATGGTACTAAGGTGGATATTTGGTCATGTGGTGTTATTCTCTTTGTTCTTGTTGCTGGTTATCTTCCATATAATGATCCAAATTTGATGGTGTTGTATAGGAAGATATATAGCGGAGAATTTAAGTGTCCACGGTGGTTTTCACCGGATCTACGACGGTTATTATCACGGTTGATGGATACGAATCCTGAAACTAGGATAACCGTTGATGAGATTTTAAGGGATTCTTGGTTTAGAAAAGGGTATAAGGCGGTGAAGTTTTATGAAGAGGGTTTTGATTTTGGGGTGAAGGTGAATGGAGAGGAAGAGGATAGAACTGTGAATTTGAATGCCTTTGATTTGATATCGTTTTTTTCTTCAGGGTTGAATCTTACAAGGTTGTTTGGGGAGGGTGAGGAGGGGGAGAGGTTTATGTTGAGGGAGTTGCCGGAGAAGGTTGTTGAGAAGGCGGAGGCGGCGGCGAAAGCAGAGGGGCTAATTGTGAGGAAAAAGAAAGAGGGTGGGGTGGAAATTGAAGTGCAAAATGGGGATTTGGTGATTGGTGTGGAGGTTTACAGGTTAACGGCTGAGCTGGTTGTGGTTGATGTGAAGAGGTTTGGTGGAGATAAGGTTGCTTTCGAGGATGTTTGGAGTAATAAATTGAGGCCACATTTCTGTGTTGCAACGACGTCGAATCAGGACCAAACTCAGTCTCACGCAGTTTCTGCTGACTGA 1308 0.458 MPETEQTPQAAETTTALFGKYEVGKLLGCGAFAKVYHARNTANGQSVAVKVINKKKVTATGLAGNVKREISIMSRLRHPHIVKLHEVLATKTKIYFIMEFAKGGELFAKIANKGRFSEDLSRRYFQQLISAVGFCHSRGVFHRDLKPENLLLDDKGNLKVSDFGLSAMKEQVRVDGMLHTLCGTPAYVAPEILAKRGYDGTKVDIWSCGVILFVLVAGYLPYNDPNLMVLYRKIYSGEFKCPRWFSPDLRRLLSRLMDTNPETRITVDEILRDSWFRKGYKAVKFYEEGFDFGVKVNGEEEDRTVNLNAFDLISFFSSGLNLTRLFGEGEEGERFMLRELPEKVVEKAEAAAKAEGLIVRKKKEGGVEIEVQNGDLVIGVEVYRLTAELVVVDVKRFGGDKVAFEDVWSNKLRPHFCVATTSNQDQTQSHAVSAD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01435 435 Gene3D Kinase associated domain 1, KA1 307 418 - -
Car02g01435 435 SUPERFAMILY Protein kinase-like (PK-like) 18 289 IPR011009 -
Car02g01435 435 Pfam NAF domain 306 361 IPR004041 GO:0007165
Car02g01435 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Car02g01435 435 PANTHER - 1 422 - -
Car02g01435 435 SMART serkin_6 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01435 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 422 - -
Car02g01435 435 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Car02g01435 435 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Car02g01435 435 Pfam Protein kinase domain 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01435 435 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Car02g01435 435 ProSiteProfiles Protein kinase domain profile. 21 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01435 435 CDD CIPK_C 308 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01435 Car-Chr2 41204550 41206858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01435 1 422 CBL-interacting serine-threonine protein kinases AT2G30360 60.091 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car02g01435 Pkinase 8.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01435 - K12761 gmx:100815088 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01435 02 41204550 41206858 Car02g01435 02 41204550 41206858 ECH
Car05g01366 05 57582074 57584066 Car02g01435 02 41204550 41206858 PCT