Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01433 ATGGAGAAAACAACAAAAGTCTTGATGAAAAGATATGAGTTAGGAAGATTACTAGGCCAAGGAACATTTGGAAAAGTTTACTATGGAAAGAGTAAAATAACTAACCAAAGTGTAGCTATTAAAATGATTGACAAGGATAAGGTTATAAGAAATGAGCAAGCTGATAATATAATAAGGGAAATATCTATTATGAGACTTATAAAACATCCAAATGTTATACAGCTTTTTGAAGTCATGGCTAGTAAGGGTAAGATTTACTTTGTTATCGAATACGCTAAAGGTGGCGAGCTTTTTGAGAAGGTAGCTAAAGGAAAGCTCAAAGAAGAGGTTGCACACAAATACTTCAAGCAGTTAGTTAGTGCAGTTGATTTTTGTCACAGTAGAGGTGTATATCATAGAGACATAAAGCCAGAGAACATTCTGTTAGATGAGAATGAGAATTTGAAGGTCTCGGATTTCGGTTTGAGTGCTTTTGCTGAATCAAAAAGGCAGGATGGTTTGTTGCATACAACTTGTGGAACACCTGCTTATGTTGCTCCTGAAGTGATCAAAAGGAAAGGTTATGATGGTGCAAAAGCTGATATTTGGTCTTGTGGTGTTGTTCTTTTTGTTTTGTTGGCTGGTTATGTTCCTTTCAATGACACAAATTTGATGGAGATGTATAAGAAGGTAAGCAAAGGAGACTTTAAGTGTCCTAATTGGTTTCCGAAAAATGTTAAGAAGCTAATGTGTAAGATGTTGGATCCAAATCCCGACACTAGGATTTCTATAGATAAGATTAAACGATGTTCTTGGTTTAAGTATGGAGCGAATGGTAGACAGAAGAAAGATGAAGGTGAAAACAAGACTACACTCTCTTGCGTGACTACGAACCCTTCTGATCAAAGGGATGAAACTCGAAGTGATGATCTAGAAGTAGAGGCGAAGGAAGAGCCGGTTGTGCCTGTGAGTATAAACGCTTTTGATATCATCTCTCTTTCATCCGGGTTTAATCTATGTGGAATCTTTGAAGACAGTTTTAAGAAAAGGGAAGCGAAATTTACTTCAAGACAACCTGCATCGGTCATTATTTCGAGGCTGGAAGAGATTGCTAAGAGACTGAAACTGAAAATAAAGAAAAGGGCTGCTGGTTTATTGAAATTAGAGAGAGTTGATGAAGGTAGGAAAGGGAATTTAGCTATTGATGCTGAGATATTTGAGGTTACTCCATTTTTTCATTTGGTTGAAGTGAAAAAATCAAATGGAGATACATTGGAATATCATAAAATATTGAATGAAGATATAAGGCCTGCTCTTCAAGATATTGTTTGGGTTTGGCAAGGTGAATTACACGAACAATCAGAGCAACAGCAACAGTCACAGTCATAA 1368 0.3648 MEKTTKVLMKRYELGRLLGQGTFGKVYYGKSKITNQSVAIKMIDKDKVIRNEQADNIIREISIMRLIKHPNVIQLFEVMASKGKIYFVIEYAKGGELFEKVAKGKLKEEVAHKYFKQLVSAVDFCHSRGVYHRDIKPENILLDENENLKVSDFGLSAFAESKRQDGLLHTTCGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYVPFNDTNLMEMYKKVSKGDFKCPNWFPKNVKKLMCKMLDPNPDTRISIDKIKRCSWFKYGANGRQKKDEGENKTTLSCVTTNPSDQRDETRSDDLEVEAKEEPVVPVSINAFDIISLSSGFNLCGIFEDSFKKREAKFTSRQPASVIISRLEEIAKRLKLKIKKRAAGLLKLERVDEGRKGNLAIDAEIFEVTPFFHLVEVKKSNGDTLEYHKILNEDIRPALQDIVWVWQGELHEQSEQQQQSQS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01433 455 PANTHER - 2 451 - -
Car02g01433 455 Gene3D Kinase associated domain 1, KA1 316 438 - -
Car02g01433 455 Pfam NAF domain 315 373 IPR004041 GO:0007165
Car02g01433 455 MobiDBLite consensus disorder prediction 272 302 - -
Car02g01433 455 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 451 - -
Car02g01433 455 Gene3D Transferase(Phosphotransferase) domain 1 2 315 - -
Car02g01433 455 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01433 455 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01433 455 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Car02g01433 455 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01433 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Car02g01433 455 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Car02g01433 455 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Car02g01433 455 CDD CIPK_C 319 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01433 Car-Chr2 41179670 41181957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01433 1 445 CBL-interacting serine-threonine protein kinases AT5G58380 65.198 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car02g01433 Pkinase 2.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01433 - K07198 gmx:100779316 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01433 02 41179670 41181957 Car02g01433 02 41179670 41181957 ECH
Car02g01433 02 41179670 41181957 Car05g01525 05 59637063 59639352 ECH
Car05g01362 05 57559183 57561772 Car02g01433 02 41179670 41181957 ECH
Car03g01384 03 59078340 59083105 Car02g01433 02 41179670 41181957 ECH
Car05g01362 05 57559183 57561772 Car02g01433 02 41179670 41181957 PCT