Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01431 ATGTTTGGATGTCAAGAGACAGAAAGATTAGATGAACTTGAAAAGGTCAACTCAGAGGGAGAAACATCTTTACAAATGGGAAGGAAGCATTTTTATGGGACAACCTTAAACACAGTAACTCCTTGTGCTGCATGTAAGCTTTTGAGAAGAAGGTGTGCTGAGGAATGTCCTTTTTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGCAGCTGTTCATAAAGTTTTTGGTGCAAGCAATGTCTCTAAGTTGCTAATGgaggtacctgaaggacaaagaggtgatgcagcaaatagcatggtttatgaagcaaacttgagattaaGAGATCCAATATATGGATGCATGGGTGCAATATCATCTTTACAACAACAAGTTCAATCATTACAAGCAGAATTACAAGCTATAAGAGCAGAGATACTAAAATACAAATACAGAGAAGCTACTAATTTTATTTCTTCTAATCATTCTACTTTAGTTTCATCAATGCCTAATTCAACTCAAAACTCATCACAACCTCTttcttcttcttcttcttctcttcCATTACCAAAACTATTGCCTTCTCATGAATCTATTATCCTTTCATCTTTGTCTTCATCTTCTGCTTCTAATTCTGTTTACACTTCAAATAAGAGTACTATGAGTCATGGATCAATTTCTAGTGAAAATATTCCATACTTTGTTTAA 693 0.2987 MFGCQETERLDELEKVNSEGETSLQMGRKHFYGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLMEVPEGQRGDAANSMVYEANLRLRDPIYGCMGAISSLQQQVQSLQAELQAIRAEILKYKYREATNFISSNHSTLVSSMPNSTQNSSQPLSSSSSSLPLPKLLPSHESIILSSLSSSSASNSVYTSNKSTMSHGSISSENIPYFV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01431 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 229 - -
Car02g01431 230 MobiDBLite consensus disorder prediction 204 224 - -
Car02g01431 230 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
Car02g01431 230 MobiDBLite consensus disorder prediction 204 230 - -
Car02g01431 230 PANTHER LOB DOMAIN PROTEIN 26 229 - -
Car02g01431 230 Coils Coil 120 147 - -
Car02g01431 230 MobiDBLite consensus disorder prediction 161 182 - -
Car02g01431 230 Pfam Lateral organ boundaries (LOB) domain 41 137 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01431 Car-Chr2 41128564 41130520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01431 33 154 AS2 family AT2G30340 82.787 3.76e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g01431 LOB 5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01431 - - ccaj:109795340 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01431 02 41128564 41130520 Car02g01431 02 41128564 41130520 ECH