Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01430 ATGGCACTttcttcttcttcttctaaatctttttctttatcatcatctAATTCAGTAGTCAAGTTTTTGTTAGCTTTGATGATGTTTTTACTTATAGGAAATTGTTGTGCTGAACTCTCTGAAAACTTGTATGTTAAAAAATGTCCTAATGTTTTCAATGCTATAAACTCTGTTGTTCACTCTGCCGTGGCTAaagaacctcgtatgggagcatctcttcttcgtcttttctttcacgactgctttgttaatggttgtgatggatcggtgctacttgatgacacatcctccattaaaggagagaaaaatgcaggtccaaacaaagattctttgagaggttttgaagtgattgatgccataaagtctaaggtggaggcattatgccccggtgtggtgtcatgtgctgatattctagccattactgctcgtgactctgttGTAAATctaggagggccttattggaaggttaaacttggaagaagggattcaaaaagagccagcttcaacgatgcaaacaGTGGTGTGATTCCACCACCCTTTTCTACCCTTAAAAACCTTATCTCGAGGTTCCAAGCCCAAGGACTCTCTACTAAGGACATGGTTGCCTTATCTGGAGCTCACACAATAGGAAAGGCAAGGTGCATTGTTTATAGAGACCACATTTACAATGACACAAACATAGACAGTTTATTTGCCAAGTCAAGGAAGAGAAACTGTCCAAGAACAAGTGGTTCAATAAAAGACAACAATGTAGCAGTCCTAGATTTCAAAACACCAAACCATTTTGATAACCTGTACTACAAGAACCTCATCAACAAAAAGGGACTCCTTCATTCTGATCAAGAGCTTTTCAATGGAGGATCTACTGATTCATTGGTTAAAACTTATAGTAATAATCAAAAGGCCTTTGAAAATGACTTTGTTATTGCAATGATTAAGATGGGGAATAATAATCCTCTTACTGGATCAAAAGGGGAGATTAGGAAGAATTGTAGGAGAGCCAATTAA 1008 0.2361 MALSSSSSKSFSLSSSNSVVKFLLALMMFLLIGNCCAELSENLYVKKCPNVFNAINSVVHSAVAKEPRMGASLLRLFFHDCFVNGCDGSVLLDDTSSIKGEKNAGPNKDSLRGFEVIDAIKSKVEALCPGVVSCADILAITARDSVVNLGGPYWKVKLGRRDSKRASFNDANSGVIPPPFSTLKNLISRFQAQGLSTKDMVALSGAHTIGKARCIVYRDHIYNDTNIDSLFAKSRKRNCPRTSGSIKDNNVAVLDFKTPNHFDNLYYKNLINKKGLLHSDQELFNGGSTDSLVKTYSNNQKAFENDFVIAMIKMGNNNPLTGSKGEIRKNCRRAN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01430 335 Gene3D - 44 332 - -
Car02g01430 335 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Car02g01430 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Car02g01430 335 Pfam Peroxidase 57 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 Gene3D Peroxidase, domain 2 177 314 - -
Car02g01430 335 PANTHER PEROXIDASE 19 334 - -
Car02g01430 335 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 ProSiteProfiles Plant heme peroxidase family profile. 38 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 SUPERFAMILY Heme-dependent peroxidases 39 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 PANTHER PEROXIDASE 72-RELATED 19 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01430 335 CDD secretory_peroxidase 38 333 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01430 Car-Chr2 41114408 41119841 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01430 22 335 Peroxidase AT5G58400 63.057 1.16e-145 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01430 02 41114408 41119841 Car02g01430 02 41114408 41119841 ECH
Car03g01378 03 59000691 59002756 Car02g01430 02 41114408 41119841 ECH