Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01428 ATGGCATCTAGTTATCTTATGCTTATTATGATCACATTATTGATCCCTACTAACTCATTACTCACTCCACATTTTTATGATAAAGTTTGCCCTCAAGCATTACAAGTCATAAAGTCAGTTgttcatcaagcaattcttcgagagcgacgcattggagcatctctcctacgcttgcattttcatgactgcttcgttaatgggtgtgatggatcagttctgctagatgacacaaagaatttcacaggagagaaaacagcatttccaaatattaattcaataagaggattttctgtggttgatgaaatcaaagctgctgttgataaagcttgtaaacgccctgtggtttcatgtgctgatattttagccacagcagctcgtgactctgtagccattttaggaggtccacaactttggtacaatgtgttactaggaagaagagatgcaagaaaagcaagcaaagcagctgcaaatgcaaatctcccacctccaacattcaacttctcacagcttatttcaaatttcaaatctcatggattagttgtaaaagaccttgtagcactttcaggtGGCCACACTATTGGATTTGCTAAATGCACCACCTTTAGAAACAGAATTTACAATGAAACAAATATTGACCCTAGTTTTGCAGCATCTTTGAGGAAAAATTGTCCCAAAAAAGGTGGTGACAACAATTTAACACCACTTGATTTCACTCCTTCAAAAGTTGACACTACTTACTATAAATCTTTGTTACATAAAAAGGGTCTTCTCCATTCTGATCAACAATTGTTTAAGGGACTAGGTAGTGAAAGTGACAAATTGGTGCAACTATATAGCAAGAGCCCTTTAACATTTGCTAGAGATTTCAAGACTTCTATAATCAAGATGGGAAATATGAAGCCTCTAACCGGAAGGCAAGGAGAGATTAGACGTAATTGCAGAAGGATCAATTAA 954 0.1866 MASSYLMLIMITLLIPTNSLLTPHFYDKVCPQALQVIKSVVHQAILRERRIGASLLRLHFHDCFVNGCDGSVLLDDTKNFTGEKTAFPNINSIRGFSVVDEIKAAVDKACKRPVVSCADILATAARDSVAILGGPQLWYNVLLGRRDARKASKAAANANLPPPTFNFSQLISNFKSHGLVVKDLVALSGGHTIGFAKCTTFRNRIYNETNIDPSFAASLRKNCPKKGGDNNLTPLDFTPSKVDTTYYKSLLHKKGLLHSDQQLFKGLGSESDKLVQLYSKSPLTFARDFKTSIIKMGNMKPLTGRQGEIRRNCRRIN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01428 317 Gene3D Peroxidase, domain 2 161 296 - -
Car02g01428 317 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 CDD secretory_peroxidase 21 316 IPR033905 GO:0004601|GO:0042744
Car02g01428 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Car02g01428 317 PANTHER PEROXIDASE 72-RELATED 5 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PANTHER CATIONIC PEROXIDASE 5 316 - -
Car02g01428 317 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 Pfam Peroxidase 38 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Car02g01428 317 SUPERFAMILY Heme-dependent peroxidases 21 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car02g01428 317 Gene3D - 24 314 - -
Car02g01428 317 ProSiteProfiles Plant heme peroxidase family profile. 20 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01428 Car-Chr2 41084951 41087855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01428 21 317 Peroxidase AT5G05340 57.000 1.97e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01428 K00430 - gmx:100811170 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01428 02 41084951 41087855 Car02g01428 02 41084951 41087855 ECH