Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01423 ATGGAATCTCAAAATGGAGAGCATGATGCTTCTAATTTGCTCAAAGCTCAAAGTCATATATGGAATCATATTTTCAATTTCATAAATTCGATGTCACTTAAATGTGTAGTTGATTTAGGTATACCTGATATCATACACAACTATGGAAAACCAATGTCTCTCTCAAAACTCATTCCTTTATTACCAATTCACCCTTCAAAAACTTTCTTCATATATCGCTTGATGCGAATCATGACTCATTCTGGTTTTTTCTCTCAACATAATATTTCAGAGAATGAGTTAGAAACTGAGTATGTACTAACTGATACATCTTTATTGCTACTTAAGGACAATCCAATGAATATGAGATCATTCGTGCATTTAGTGTTTGATCCTGTTTTGACGAAACCGTGGCATCAATTGTCTAGTTGGTTAACAAATGACGATCCTACTGCATTTGAAACGACACATGGGATGTTGTTTTGGGATTATGCGGAGCGTGAGTCCAAAATTAACAACTTGTTCAATGATGCAATGGCGAGTGATGCTAGATTGGTGAGCAGTGTTGTGATTGAGAAGTGCAAGGAAGTGTTCAATGGATTGGAGTCATTGGTTGATGTTGGAGGAGGTACAGGGACCATGGCAAAGGCTCTTGCCAAATCATTTCCACAATTGGAGTGTACTGTATTTGATCTACCACATGTTGTTGTGGGTTTGCAAGGAACTGACAATCTAAAATATGTTGGTGGGGACATGTTCAAAGAAATTCCTCCTGCAGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGACGACGAATGTGTGAAGATATTGAAGAAATGCAAGGAATCACTTTTGAAGAAAGGTAACGAAGGAAAAGTGATTATCATAGACATGGTCTTAGATACTAAGAAGGGAGACATTAATGAATCAGGAAAAACACAATTGTTCTTTGATATGTTGATGACGGTACTAGTCAAAGGAAAAGAGAGGAATGACAAAGAATGGATTAAGTTGATTTCCTTAGCCGGTTTTAGTGACTATAAGATAATTCCAATTTTAGGTTTAAGGTCTTTGATTGAGGTCTATCCATAA 1080 0.3657 MESQNGEHDASNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNYGKPMSLSKLIPLLPIHPSKTFFIYRLMRIMTHSGFFSQHNISENELETEYVLTDTSLLLLKDNPMNMRSFVHLVFDPVLTKPWHQLSSWLTNDDPTAFETTHGMLFWDYAERESKINNLFNDAMASDARLVSSVVIEKCKEVFNGLESLVDVGGGTGTMAKALAKSFPQLECTVFDLPHVVVGLQGTDNLKYVGGDMFKEIPPADAILLKWILHDWNDDECVKILKKCKESLLKKGNEGKVIIIDMVLDTKKGDINESGKTQLFFDMLMTVLVKGKERNDKEWIKLISLAGFSDYKIIPILGLRSLIEVYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01423 359 PANTHER O-METHYLTRANSFERASE 9 359 - -
Car02g01423 359 Gene3D - 1 107 IPR036388 -
Car02g01423 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
Car02g01423 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Car02g01423 359 CDD AdoMet_MTases 197 296 - -
Car02g01423 359 PANTHER O-METHYLTRANSFERASE 9 359 IPR016461 GO:0008168
Car02g01423 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 358 IPR029063 -
Car02g01423 359 Pfam O-methyltransferase domain 131 341 IPR001077 GO:0008171
Car02g01423 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 359 IPR016461 GO:0008168
Car02g01423 359 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Car02g01423 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01423 Car-Chr2 41021007 41022815 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01423 31 346 Monolignol Biosynthesis Gene Families AT5G54160 32.710 1.36e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01423 - K16040 gmx:100781008 539.65