Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01417 ATGGAATCCCAAAATGGAGAGCATGTTGCTTCCAATTTGCTCAAAGCTCAGAGTCATATATGGAATCACATTTTCAATTTCATAAATTCGATGTCACTTAAATGTGTAGTTGATTTAGGTATACCTGATATCATACACAACTATGGAAAACCAATCTCACTCTCAAAACTCATTCCTTTATTACCAATTCACCCTTCAAAAACTATCTTCATATATCGCTTGATGCGAATCATGACTCATTCTGGTTTTTTCTCTCAACAGAATATTACAGAGAATGAGTTAGAAACTGAGTATATGTTAACTGATACATCTTTATTGCTACTTAGCGATAATCCAATGAGCGTGGCACCATTCGTGCACGCGATGCTTGATCCTGTTTTGACGAATCCGTGGCATCAATTGTCAACTTGGTTAACAAATGGCGATCCAACTGCATTTGAAACGAAGCATGGGATGTTGTTTTGGGATTGTGCGGAGCGTGAGCCCAAATTTAACAACTTGTTCAATGATGCAATGGCAAGTGATGCTAGATTGGTGAGTAGTGTTGTGATTGAGAAGTGCAAAGAAGTGTTCAATGGATTGGAGTCAATTGTTGATGTTGGAGGAGGCATAGGGACCATGGCAAAGGCTCTTGCAAAATCATTTCCACAATTGGAGTGCACTGTATTGGATCTACCACATGTTGTTGCTGGCTTGCAAGAAACTGAGAATCTAAAATATGTTGGTGGGGACATGTTTAAAGAAATTCCCTCTGCAGATGCCATTTTATTGAAGTGGATATTGCATGACTGGAATGATGATGAATGTGTAAAGATCTTAAAGAATTGTAAGGATGCAATAGCAAAGAAAGGTAAAGAAGGGAAGGTGATTATCATAGACATGGTGATGGAGAATGAGAAGGGAAAAAATGAATCCCTTCAAACACAACTCTTCTTTGATATGCTCATGATGGTGTTGGTCACCGGAAAAGAGAGAACTAAGAAAGAATGGGTTAATTTAATTTCCTCTTCCGGTTTCAGTAATTACAAGATAACTCCAATTTTGGGCCTAAGATCCGTTATTGAGATCTATCCATAA 1077 0.3807 MESQNGEHVASNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDIIHNYGKPISLSKLIPLLPIHPSKTIFIYRLMRIMTHSGFFSQQNITENELETEYMLTDTSLLLLSDNPMSVAPFVHAMLDPVLTNPWHQLSTWLTNGDPTAFETKHGMLFWDCAEREPKFNNLFNDAMASDARLVSSVVIEKCKEVFNGLESIVDVGGGIGTMAKALAKSFPQLECTVLDLPHVVAGLQETENLKYVGGDMFKEIPSADAILLKWILHDWNDDECVKILKNCKDAIAKKGKEGKVIIIDMVMENEKGKNESLQTQLFFDMLMMVLVTGKERTKKEWVNLISSSGFSNYKITPILGLRSVIEIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01417 358 Gene3D - 2 107 IPR036388 -
Car02g01417 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Car02g01417 358 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Car02g01417 358 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Car02g01417 358 Pfam O-methyltransferase domain 131 340 IPR001077 GO:0008171
Car02g01417 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Car02g01417 358 PANTHER O-METHYLTRANSFERASE 8 358 - -
Car02g01417 358 CDD AdoMet_MTases 197 285 - -
Car02g01417 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Car02g01417 358 PANTHER O-METHYLTRANSFERASE 8 358 IPR016461 GO:0008168
Car02g01417 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01417 Car-Chr2 40903800 40905337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01417 31 344 Monolignol Biosynthesis Gene Families AT5G54160 31.661 1.91e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01417 - K16040 gmx:100781008 551.206