Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01407 ATGAATGAGAAGCTTAATCGAGTAATTTGGAAGCAGTTTATGACTATAAGACAAGAAGTGTTACCTCACTCCAAGTCCAACATCATGGAGATAGATGATATTATAGACAACCTACACAAAACTGTGAAGAACATGGTGGAAGATGGGTTTCAAACTGAATGTTGCAAAGTGTACAACATTTTTCGAAGCAGATTCATCAACAAGTGTCTATGTAAACTTGGATTGCAAGAGGTTAACTTGTGTGATGTTGAGAATGAGAATATTGAGAATTTGATTAGTGATTTCAACATTGCTCTAAGGATACTTCTTCCCAATGAGAGAAGGGTATGGAATCACATATTTTCTATGTATTCTTTTGAGTATAGCATTTTTTCATCATTAGAGTGGAGGAGAATTGAAATTGAATTGTGGGCCAAATTTATGGTGTTGGAGACTCGTATTCATGGCAATTCTTCTCATGAATTTGTTCATGATTCAGGGGTTCATCCACTTACTCGTGAAGAAATGAAATGCATTAAGGATGTTTGTGAAGATCATAGGGATGTTGTGGCTCATTTCCAAATCCTTGAGATGATACAATTATTAGAAAGTAATTTGGATGCAAAATCCAAAATCAACAAAAACTCTGCTTTAGGATATCTTTTCATGTTGAATAATAATAGATACATACAATTGGAGGCAAAATATGGTCCCTTGCTAAATCTATTGGGCAAAGAGTGGACTCAAATACAAACTTCAAAAGTTAGAAGAAACATTAAACATTACATAAAATGCTCATGGAATAAGGTTCTGAACTTATTGGAGAATGATGAGTCAATGACTACTAATGTTGCTATTGAATCAATGAGATTGTTCCATATAAACTTTTCAGATATATGCAAAGCTCAGTCTATATGTTTTGTTATCGATGAGAGGCTAAGGAAAACAATGCGAAAGTACTTGAAAAAGATGTTGCTGCCACTATATGAAAACTTCATTAGGAGATTTCAGGATGTTGTTGGTAAGGATGTTGCTGATCAGTATATTAAATATGGAATGTCAGACATTGAAGATCGAATCAACCATTTATTTCTTGAAATGAAGGAGACAACACCTGTCACCGGCCACCATAGCTATGAGCCTAACATCGTATAG 1134 0.3448 MNEKLNRVIWKQFMTIRQEVLPHSKSNIMEIDDIIDNLHKTVKNMVEDGFQTECCKVYNIFRSRFINKCLCKLGLQEVNLCDVENENIENLISDFNIALRILLPNERRVWNHIFSMYSFEYSIFSSLEWRRIEIELWAKFMVLETRIHGNSSHEFVHDSGVHPLTREEMKCIKDVCEDHRDVVAHFQILEMIQLLESNLDAKSKINKNSALGYLFMLNNNRYIQLEAKYGPLLNLLGKEWTQIQTSKVRRNIKHYIKCSWNKVLNLLENDESMTTNVAIESMRLFHINFSDICKAQSICFVIDERLRKTMRKYLKKMLLPLYENFIRRFQDVVGKDVADQYIKYGMSDIEDRINHLFLEMKETTPVTGHHSYEPNIV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01407 377 Pfam Exo70 exocyst complex subunit 187 354 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car02g01407 377 PANTHER PROTEIN, PUTATIVE-RELATED 32 359 - -
Car02g01407 377 SUPERFAMILY Cullin repeat-like 33 357 IPR016159 -
Car02g01407 377 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 359 IPR004140 GO:0000145|GO:0006887
Car02g01407 377 Gene3D Exocyst complex component Exo70 130 365 - -
Car02g01407 377 Gene3D Exocyst complex component Exo70 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01407 Car-Chr2 40768953 40771096 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01407 30 357 EXO70 exocyst subunit family AT5G58430 32.143 2.65e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01407 - K07195 cam:101511504 771.541