Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01404 ATGTCACTTAGTTTATCGAGGCAAATTCAGTGCGGATTTGACGTCGACCTTATGTACTTTTATCTTGGATGTCTAATTGTTCAACTCATGAAGATTAAATTGTTGTTATCTATTATTGGAATTGGTTATAGTTACTGTCTTATTATTTTTCGTTCTTCTTTCTCAAACTTGAATGTTACACAAGAAAATCAGTTTCATGGACTCGAAGAACAACAAGTAGTCATTCAAGTAGATTCAAAACAGCTAGAAAATATCAGTAGTGGTAGCATCATACAACACTTTCGTACATGTCAGGAACTGATTCTGCAACGGTTCCTAACTTGTATGAATGAGCTTAAGCAAAACAACTCAAATATTGGTAAGATGCTTTTGCAGGAGGTTGAAGGTAACTATAAGTTGGTGGTGACTGATCACAACTTCATTATTGATGCCCTGTCAAATGAAACAATCAACCACCTTAAGGAAACAGTGAAATCAATGGTGAATGTTGGATTTGAGAAAGAGTGCTATGAGATTTATAGCAGTTATCGTAAGGAATGGTTGGAAGATTTGTTAATAAATAAATTATTAGCATTGGGAAAGATGGGATTACAGGAATACGTGATTGGAAGATGGATTAAAAGTTCAAAGGTTGCTCTTAGAATATTATTTCCCAGTGAGCGTCAACTATACAATAGTGTTTTCTCTGAGTCCACCTATGCATCATCTAGTCTCTATTTCTCAAGGATTTGTTGTGGAGCGACAATACAGCTGCTGAATTTTGCTGATTCATTTGCAAATCGAAGTCCTTCAGCGTGGCGTTTGTTTAAAATCCTTGACTTGTTTGAGACACTGTGTGATTTGTTTCCCGATTTTGAATCATTGTTTCATGCTTCTTTGGTGAATGAAGCAATTAAAATAAAGAATAGATTGGCTGAAGTAAGTAGAGACATTTTCATGGAATTTGGTAAATTGATATTTGTTACGCCAGACGCAGACTTAGATTGTTGGGCGGATGGTGGGGTTCATCCAATGACAAGTGAGGCCTCTGGCTACATCCTTATGGCTTTCTGGTCAAGGGTAAATCTGGAAAGAATTTTACTAGAATACCCCTTGGTTGTTGTTGATGGAATGGGAAAATATTTATTCTTTTCGCAGATGGAGATGATAATGGTTCAGTTTGAGACAAAATTGGAAGCTAAGTCACAAATTTATGAGGACCCTACTTTGCGCCATTTTTTCATGATGAATAATCTAAGTCACGTTGAGTACAAATTGAAAACCTTTTGGGATTATAGGTTCTTTAAAAACAAGGGGAGATACTTTGAACTCTATTGTAATAGCTCATGGAATAAGGTGAAAGATTTTTTGAAGATGGATATCAATTCTGAAGTAGATTCAATGAAAGACAATCTCAGTTTGTTCAATGAAAAGTTTAGGGAGATGTGTGGAATTCAGTCTTCATGGTGTGTTTTTGATGAGCAATTAAGGAAACATATAATAATATCTCTGAAAAACATGTTGTTACCAACATACGAAAACTTCATTGTGAGATTTGAGAATGTTGTTGGTAAAAATGCCGATGAGTATATAATGTATGGAATTTCTGACATTCAAGATCAACTCAACCATTTATTTCAAGTAGAGGATGTTGACTCTGCTAAAGGATCAGTTAGGAATCAATTAGTTAGTTACTATAGCTAG 1683 0.3506 MSLSLSRQIQCGFDVDLMYFYLGCLIVQLMKIKLLLSIIGIGYSYCLIIFRSSFSNLNVTQENQFHGLEEQQVVIQVDSKQLENISSGSIIQHFRTCQELILQRFLTCMNELKQNNSNIGKMLLQEVEGNYKLVVTDHNFIIDALSNETINHLKETVKSMVNVGFEKECYEIYSSYRKEWLEDLLINKLLALGKMGLQEYVIGRWIKSSKVALRILFPSERQLYNSVFSESTYASSSLYFSRICCGATIQLLNFADSFANRSPSAWRLFKILDLFETLCDLFPDFESLFHASLVNEAIKIKNRLAEVSRDIFMEFGKLIFVTPDADLDCWADGGVHPMTSEASGYILMAFWSRVNLERILLEYPLVVVDGMGKYLFFSQMEMIMVQFETKLEAKSQIYEDPTLRHFFMMNNLSHVEYKLKTFWDYRFFKNKGRYFELYCNSSWNKVKDFLKMDINSEVDSMKDNLSLFNEKFREMCGIQSSWCVFDEQLRKHIIISLKNMLLPTYENFIVRFENVVGKNADEYIMYGISDIQDQLNHLFQVEDVDSAKGSVRNQLVSYYS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01404 560 PANTHER PROTEIN, PUTATIVE-RELATED 1 540 - -
Car02g01404 560 Gene3D Exocyst complex component Exo70 86 548 - -
Car02g01404 560 Pfam Exo70 exocyst complex subunit 204 536 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car02g01404 560 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 540 IPR004140 GO:0000145|GO:0006887
Car02g01404 560 SUPERFAMILY Cullin repeat-like 102 539 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01404 Car-Chr2 40726138 40727820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01404 135 540 EXO70 exocyst subunit family AT5G58430 41.972 7.48e-94 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01404 - K07195 lja:Lj2g3v2364680.2 537.724