Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01403 ATGGCGTCCATGTGGACTCGAATTATGCGAATTCTGCCTTGTTTTACTGCTGTTATCGGATTCATCTGTTACGGCCTCAGCTCGAACCATATAATTGGAAATTGGAACATTTGGAAGATAAATCCAAATGTGTTTAGTTTGATTTCGTCTGCTGCTTTTGCTATCATGTCACTAAGTTTATCAAAGCAGACTAAGTTTGGATTTGAGGTTGATCTCTTAACTTTTTTCTGCGGACATCTAATTTTACAACTCATGAAGTTAAATCTGTTTTTCACCATTCCTGGTTTTGGATTCGGTATTTTCATCTTCTATCTTCATTTGGGTTTCGGTGGCCCCAATGAAATAAGGGATCGTGCACCTGAAATTAGAGACGGAGACGTAGTCATTCAAGTGGATTCAAACTCCGAAGTAACAACTAATAATACTATGGTTCCTCCTGCTATTATTCAGATGGTTTCACCTAACGTGCAGGAGGAAACCTTACCCAACACAAATAGTAGTAGTATTACTGCTCCTATTGGTTCACCTTCACAACAAAGAAATATTGATAACAGGGTTCAGAGCAGCCTCGAAATTTGCCTAAAGGAGCTAGGTGAGATGGATGAGAGGCTTAACAACATGATTTTCCAGAAAGTGTTGGATGGACAAGTCTTTGATGATAACTCTGATCAACTGGAAAATATTTGGGGACGTAGCCGCGTGATTGAGGAGACAAAGGACATCAAGAAGAACATTTGCAAAGCATTGAAGAAAATGTTCGAAGCTGGGTATGTGACAGAGTATTGCAACGCGTACGACACTCTTCGGAATAGATTTATTAACACGTGCCTGTGTAGATTTCAATTGGAGGAGTTTAGTTTGAGCGATGTAAAGAAGGAGGATATTGGGACTTTTATTAATGCTTTCAAGGCTGCTCTGAATATACTTCGCAATGAAAGAAGACTCTTTGACAACTTCTTCTTCGGGTTCTCTCTTGTGAAGTGCAATATTTTTTCCTCGTTGGATTGGATTAGAGTTGAATTTGACTGGTTGGCTAAATTGTTGGCGTTGCAATCTCGTGTGTCACGTCCTTCTTTTTACGGTTGTGCAATCCATCCCCTTACCCGCAAAGTTATGAAGCGCCTCATGTATATTTCTCGAAATTTTGAAAATGCGGCTACTTGCTTCAACATTCCTGGGATGATACAGTTGTTAGAGACTAATGTGGATGTGAAGTCTAAAAGCTATACGGAACAGAACCGGGCTTTGGGCTATCTTTTCAAGCTGAATAATACTAGATTTATACAAGTGATTGCCTCATATCATTCCTTGTTAGCCATTTTGGGTGCAGATTGGGACCGAATGCAAAGTGTAAAAGTCCTACAAAACATCAAAGACTATCTAAGATGCTCATGGGAGAAAGTTACACGCCTACTGGTGAGAAAGGGAAATGAAAATGACTCAACAGTAACTTTAAAGGTTTTTGTAGACACGATGAGATTGTTCGACCATCACTTTTTAGATGCATGTAGAGCTCAGTCTACTTGTTTTGTCATCGATGACACACTAAGGAAAGCAATGAGATTGTACTTGAAAAAGATGTTGCTGTTGCTATATGAAAATTTCATTGGGAGGTTCCAGGATGTTCTTGGTAAAGATGTTGTTGATCACCATATCAAGTATAGCATAAAAGACATTGAAGTTCGACTCAAAAATCTATTTCTTGAAAGCCAGTCGATGAATCAGTTTCCAGAAGAAGGCAAGCATAGGAGCCAACTGAAGAGAAGGGTACCCAAGCTTGAGCATAAATATGATTCCATTTGA 1803 0.3927 MASMWTRIMRILPCFTAVIGFICYGLSSNHIIGNWNIWKINPNVFSLISSAAFAIMSLSLSKQTKFGFEVDLLTFFCGHLILQLMKLNLFFTIPGFGFGIFIFYLHLGFGGPNEIRDRAPEIRDGDVVIQVDSNSEVTTNNTMVPPAIIQMVSPNVQEETLPNTNSSSITAPIGSPSQQRNIDNRVQSSLEICLKELGEMDERLNNMIFQKVLDGQVFDDNSDQLENIWGRSRVIEETKDIKKNICKALKKMFEAGYVTEYCNAYDTLRNRFINTCLCRFQLEEFSLSDVKKEDIGTFINAFKAALNILRNERRLFDNFFFGFSLVKCNIFSSLDWIRVEFDWLAKLLALQSRVSRPSFYGCAIHPLTRKVMKRLMYISRNFENAATCFNIPGMIQLLETNVDVKSKSYTEQNRALGYLFKLNNTRFIQVIASYHSLLAILGADWDRMQSVKVLQNIKDYLRCSWEKVTRLLVRKGNENDSTVTLKVFVDTMRLFDHHFLDACRAQSTCFVIDDTLRKAMRLYLKKMLLLLYENFIGRFQDVLGKDVVDHHIKYSIKDIEVRLKNLFLESQSMNQFPEEGKHRSQLKRRVPKLEHKYDSI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01403 600 Pfam Exo70 exocyst complex subunit 393 564 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car02g01403 600 MobiDBLite consensus disorder prediction 580 600 - -
Car02g01403 600 MobiDBLite consensus disorder prediction 160 180 - -
Car02g01403 600 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 569 IPR004140 GO:0000145|GO:0006887
Car02g01403 600 MobiDBLite consensus disorder prediction 578 600 - -
Car02g01403 600 Gene3D Exocyst complex component Exo70 347 575 - -
Car02g01403 600 Gene3D Exocyst complex component Exo70 175 335 - -
Car02g01403 600 PANTHER PROTEIN, PUTATIVE-RELATED 6 569 - -
Car02g01403 600 SUPERFAMILY Cullin repeat-like 244 567 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01403 Car-Chr2 40723453 40725411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01403 355 567 EXO70 exocyst subunit family AT5G58430 32.468 1.49e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01403 - K07195 cam:101502083 1136.32