Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01402 ATGATTGGATCAAAAAATACACTGAAAATTCGCCAGCATCATGAGCATTATCAAAGAAGCTCATGGAATAAGGTGTTGGACAACAATGAATCAATGCATACTAATGAGCTTAGGGAAGAAATAAGAATTTCTATTGAGAAAACCTTGTTGCCAGCTTATGGAAACTTCATTGGGTGGTTTCAGAGTGTTCTTGAACTTGGTAAGAATGCTGATAAATATATAAAGTATGGAGCAGAGGATATTGAAGCAAGACTCAATGATTTGTTCCAAGGAAGCAGTGGATCAACTACTAGCCAAAAGTGA 303 0.363 MIGSKNTLKIRQHHEHYQRSSWNKVLDNNESMHTNELREEIRISIEKTLLPAYGNFIGWFQSVLELGKNADKYIKYGAEDIEARLNDLFQGSSGSTTSQK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01402 100 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 34 94 - -
Car02g01402 100 SUPERFAMILY Cullin repeat-like 7 89 IPR016159 -
Car02g01402 100 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 94 IPR004140 GO:0000145|GO:0006887
Car02g01402 100 Pfam Exo70 exocyst complex subunit 35 87 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car02g01402 100 Gene3D Exocyst complex component Exo70 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01402 Car-Chr2 40710904 40711303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01402 5 93 EXO70 exocyst subunit family AT5G58430 41.600 2.00e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01402 K07195 - gmx:100803694 119.783