Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01400 ATGGAGCTAGTGAAGGCATACATTCAAGATAAGGGTGGATTAGTCGGTAAGTTTGATTTCGTGATGGATACTCTACCATTGCGAAAGATACATAATCTCCATGAAATTGTGAAGTTGATGGTATGCGCTGGGTATGAGAAAGAGTGCTCCGATCTACTGAATTTTGCAGATGCAGTTGCTTATGGGAGGGTTTCCAAATGGCATTTATTCAAAATGCTCGATATATTCGAGCATTTGAGTAATCTAATTCCGAAATTTCATAGTTTGTTCGCTGATTCATCATTATTGAACGAAGCAATCGCGGTTCAAAACATAATTGGAGAAGCTAGCAGAGACAATTTCATGGAAATGCACAATTTTATTGTTTCGCCTTATGGTCATCCTCATCAGATCACTGTCGAGATCATGAGTTACCTGGCTGCTGCCTGCATATCTCGGCCGATACTCTAA 450 0.4 MELVKAYIQDKGGLVGKFDFVMDTLPLRKIHNLHEIVKLMVCAGYEKECSDLLNFADAVAYGRVSKWHLFKMLDIFEHLSNLIPKFHSLFADSSLLNEAIAVQNIIGEASRDNFMEMHNFIVSPYGHPHQITVEIMSYLAAACISRPIL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01400 149 PANTHER EXOCYST COMPLEX PROTEIN EXO70 52 147 IPR004140 GO:0000145|GO:0006887
Car02g01400 149 PANTHER EXOCYST COMPLEX PROTEIN EXO70 18 52 IPR004140 GO:0000145|GO:0006887
Car02g01400 149 SUPERFAMILY Cullin repeat-like 20 143 IPR016159 -
Car02g01400 149 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 52 147 - -
Car02g01400 149 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 18 52 - -
Car02g01400 149 Pfam Exo70 exocyst complex subunit 47 145 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car02g01400 149 Gene3D Exocyst complex component Exo70 50 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01400 Car-Chr2 40682490 40683194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01400 41 149 EXO70 exocyst subunit family AT5G58430 45.378 1.20e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01400 K07195 - egr:104437344 88.1965