Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01399 ATGCCAAAGCTAGCTGTTCCGGCCGACGGTGGGCATCATGATCCAATGATGAAAACCATCGTGATCAGTCTTGTTTCATTTCCGTCACAAAAGGAGAAGACAATAGAGCTGGTAGAGTGCATATTGGCATCAGAGTCTGAAAAATATGTGGATCCTTCTTTGCGTCATTTTTTCATGATGAATAGTTGGAGGTATTTAGAACAGGCAAATAAAATAAGGGATTTATATGATACTTTTGGCTATGTTTGGTTCAAAAAAACTAGATCAAAAGTGATACAAAACCTTGAACTCTATCAAAGAAGTTCATGGGATAAGGTGCTGGAGTTTTTAAAGTTGGATATCAATGACTCTGTTGATTCGATGAAAACAAAGCTCAGTATGTTCAACATGCACTTTAAAGAGATATGCAGAGTTCAGTGCATTTGGTCTGTTCATGATATGAATCTAAGAGAACAAATAATTGCAACTCTCAAAAACATCTTGCTGCCAGCTTATGGAATCTTCATAGGGAGGTTTCAGGATTTTCTTAAAAATAAAGCTTACGATTATATTGAGTATGGAATGTTTGACATTCAAGATATACTCGATAATATGTTTCTTGGAAACAAGAAAAACAATTGA 621 0.3543 MPKLAVPADGGHHDPMMKTIVISLVSFPSQKEKTIELVECILASESEKYVDPSLRHFFMMNSWRYLEQANKIRDLYDTFGYVWFKKTRSKVIQNLELYQRSSWDKVLEFLKLDINDSVDSMKTKLSMFNMHFKEICRVQCIWSVHDMNLREQIIATLKNILLPAYGIFIGRFQDFLKNKAYDYIEYGMFDIQDILDNMFLGNKKNN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01399 206 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 200 IPR004140 GO:0000145|GO:0006887
Car02g01399 206 SUPERFAMILY Cullin repeat-like 26 199 IPR016159 -
Car02g01399 206 PANTHER PROTEIN, PUTATIVE-RELATED 23 200 - -
Car02g01399 206 Pfam Exo70 exocyst complex subunit 32 196 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car02g01399 206 Gene3D Exocyst complex component Exo70 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01399 Car-Chr2 40679073 40679693 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01399 35 202 EXO70 exocyst subunit family AT5G58430 41.714 5.40e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01399 - - cam:101500706 424.091