Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01398 ATGACACCAATTCTCATCCAAATTTGGAGATGGCTGATGCATCCAAAGGTGTGGAGATTTGGGGGCTTTGCTTCAGCTGTAGTTGGATTGCTTTGTTATGCTCTCAGTTCTTCCTTCAACTATCTCTTTGGAGAATGGAATCTTTTGAAGATTTTTCTTTACACCGTTTTCAGCTTCATAATCTGTCTGGTGATTCTATTTGCAAGGATATGGAGACACTCAAGAAGTCTTCGTTTCAAAGCTCACGCAGCATATTTGGCATTAACAATCACCTCTGTCTATTCATTTTTCTTTGATAAAGTTATGAATGGAAAACCAGATGCATATAGTATCATTTCATGTGCTGCCTTTTCTATTATGTCACTCAGTTTGTCGCGTCAAACTCAGTGCGGATTTGAAGTGGATCTTCTTTACTTTTTTCTAGGAGTTCTAATTGTACAACTCATGAAGATTAAATTGCAGTTATTCATTGTTGGAGCAGGTTTCAGCTATTCCCTTATTATTCTCCGTTCTTCATTTTCTTCAATAGATGCCATTGCCAGAGCAGATAATGAGTACTCTGAACTCCAAAATGGAAGTTCAGTGGTTATTAACATGAATTCCCTACAATTGGACAGTACTGATATTGCTAGCAATAGCAATGGCATCAATTCACCCCAATTGGTCGGTAGTGATTTCAATAGTATGATGGATCAACTCCAGACTTGTGTGAAGGCGCTTGAGCAGGAAAATTCAAATCTCATTGAAATGCTTTTGGAGCAAATAGAAAAATATGTTGAAGAAGACTCTCAGTTGGTGGTGGCCGATCCTAACTTCATGATGGATGCACTACACCCAGAAACCATCAAAAGTGTTCAGGAAACAGCCATGTTGATGGTGACAGCTGGATTTGAAAAGGAGTTTTCCGATGTGTACAACAACTGTCGGAGGAAATGCTTGGATGAGTGCCTAATGCATAAATTATTTAGGTTTCAGAAGTTCAGTCTCGATGAAGTTCACAATATGTCGTGGCAGGACCTCAAAGAAGAGATTGAAATATGGATTAAAGCTTCCAATGTCGCTCTCAAGATACTTTTTCATGGCGAGCGACGACTCTGCGATCGCGTCTTCTTCGGATTCTCATCAGCAGCAGATTTCTCTTTCATGGAGGTTTGCAGAGGATCCACCGTTCAGTTGTTAAATTTTGCCGATGGTGTTGCAAATGGAAGGCGTTCGCCAGAGCATTTGTTTAACACCCTTAAGGTGTTTGAAACATTGCGTGACCTAATTCCAGATTTTGAATCCTTATTTTGTGATCAGCATAGTGTGTCTCTAATGAATGAAGCGATCACGATATGGAAGAGATTGGGGGAATCAATCAGAGGCATTTTCGTGGAGTTGGAGAATCTGATTGTTCGAGATTCGGCTGTGACGGTTCCCGGTGGCGGTCTTCACCCGATTACCCAGCACGTGATGAACTACCTCCATGCGGTTTGTCGGTTCTGTCCAACACTAGAGCAAGTGTTTGACGGTTCCTCACTTTCTGGGCAGATGAATAGGATTATGGACCAATTGGAGAGCAATTTGGAAGAGAAGTCCAAATCCTACGAGGACCCTTCTTTAAGCTATATTTTCTGGATGAATAACGACAAATACATAGTTGAGATGACCAAAGATACCAAACTAGGAACCCTTTTGGTCGATTTCTGGATTGGAAAACATGCTTTGAAAAAATCTCAGTATCATGCTAAATATCAAAAGACCATGGGCACTATACCCCCCACTTTAGTGCAAGATTTATTCCAGACGACTGGTCCTTTTGGAGACGTTCAGCCGTTATTGTACAGCTCTCAACAGGTTGACGAGATAGATGGGGAGAATGTGAAAGCAGATGTGCATGAAGCATCACCCTCGGAACAACAACAAATGCAAAAGGATTCATGGACGAGAACAATAGTGGTGGTATCTCCCGCACCACAATTTTGGAACCCAGATAAAATGCCACCAGATGACGGGTTTACCTGGAAAAAATACGGCAAGAAAGAAACATTTGGGTTTAAATACCCTAGGAGTTACTACAAGTGCAATGACATGAAGTTATATGCGTGTCGAGCCAAGAAGCAAGTACAACGACATGGTGTCCATCCAAATATATTTGAAGTACAATACGTAGGTGGACATTCTTGCGGCACGTCCTTAACGATACCATCGTTAATTTTACCACCACAACTAGTGAATATCTCAAGGGATACGACTCAATCATCAACTTCACCATCTGACAATGCTGGACTCTCTATTTCAAAACCAGACATTGATTTTTGGAAAACAAGTAGCTCCAATAAATGGCCACAAGGTAAA 2337 0.4108 MTPILIQIWRWLMHPKVWRFGGFASAVVGLLCYALSSSFNYLFGEWNLLKIFLYTVFSFIICLVILFARIWRHSRSLRFKAHAAYLALTITSVYSFFFDKVMNGKPDAYSIISCAAFSIMSLSLSRQTQCGFEVDLLYFFLGVLIVQLMKIKLQLFIVGAGFSYSLIILRSSFSSIDAIARADNEYSELQNGSSVVINMNSLQLDSTDIASNSNGINSPQLVGSDFNSMMDQLQTCVKALEQENSNLIEMLLEQIEKYVEEDSQLVVADPNFMMDALHPETIKSVQETAMLMVTAGFEKEFSDVYNNCRRKCLDECLMHKLFRFQKFSLDEVHNMSWQDLKEEIEIWIKASNVALKILFHGERRLCDRVFFGFSSAADFSFMEVCRGSTVQLLNFADGVANGRRSPEHLFNTLKVFETLRDLIPDFESLFCDQHSVSLMNEAITIWKRLGESIRGIFVELENLIVRDSAVTVPGGGLHPITQHVMNYLHAVCRFCPTLEQVFDGSSLSGQMNRIMDQLESNLEEKSKSYEDPSLSYIFWMNNDKYIVEMTKDTKLGTLLVDFWIGKHALKKSQYHAKYQKTMGTIPPTLVQDLFQTTGPFGDVQPLLYSSQQVDEIDGENVKADVHEASPSEQQQMQKDSWTRTIVVVSPAPQFWNPDKMPPDDGFTWKKYGKKETFGFKYPRSYYKCNDMKLYACRAKKQVQRHGVHPNIFEVQYVGGHSCGTSLTIPSLILPPQLVNISRDTTQSSTSPSDNAGLSISKPDIDFWKTSSSNKWPQGK 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01398 779 MobiDBLite consensus disorder prediction 742 757 - -
Car02g01398 779 MobiDBLite consensus disorder prediction 742 779 - -
Car02g01398 779 SUPERFAMILY WRKY DNA-binding domain 659 723 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01398 779 SUPERFAMILY Cullin repeat-like 225 580 IPR016159 -
Car02g01398 779 Pfam WRKY DNA -binding domain 663 722 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01398 779 Gene3D WRKY domain 655 724 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01398 779 Coils Coil 230 257 - -
Car02g01398 779 SMART WRKY_cls 662 724 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01398 779 MobiDBLite consensus disorder prediction 764 779 - -
Car02g01398 779 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 581 IPR004140 GO:0000145|GO:0006887
Car02g01398 779 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 25 581 - -
Car02g01398 779 Gene3D Exocyst complex component Exo70 216 603 - -
Car02g01398 779 ProSiteProfiles WRKY domain profile. 663 725 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01398 779 Pfam Exo70 exocyst complex subunit 347 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01398 Car-Chr2 40649869 40661833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01398 261 581 EXO70 exocyst subunit family AT5G58430 59.403 1.25e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car02g01398 Exo70 4.1e-62 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01398 - - cam:101500706 1553.88