Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01395 ATGAAGATTAAATTTCAGTTATTCATTGTTGGAGCAGGTTTCAGCTATTCACTTATTATTCTTCGTTCTTCATTTTCTTCATTAGATGCCATTGCCAGAGCAGATAATGAAGATGGAAATTCAGTGACTATTAACATGAATTCCCTACAATTGGACAGTGCTGATATTGCTAGCAATCGCATCGATTCACCACAATTGGTCGGTAGTGATTTCAATAGTATGATGGATCAACTCGAGACTTATGTGAAGGCGCTTGAGCAGGAAAATTCAAATCTCATTGAAATGCTTTTGGAGAAAGTAAAAAAATATGTTGAAGAAGACTCTCAGTTGGTGTTGACCGATCCTAACTTCATGATGGATGCACTACATCCAGAAACCATCAAAGGTCTTCAGGAAACAGCCATGTTGATGGTGACCGCTGGGTTTGAAAAGGAATTTTCCGATGTGTACAACAATTGTCGGAGGAAGTGCTTGGATGAGTGTTTAATGCATAAAATATTTGAGTTACAGAAGTTCAGTATCGATGAAGTTCACAATATGTCGTGGCTGGACCTCAAAGACGTGATTGAAAGATGGATTAAAGCTTCCAATGTCGCTCTCAAGATACTTTTTCATGGCGAGCGACGACTTTGCGATCGCGTCTTCTTCGGATTCTCATCATCAGCAGATTTCTCTTTCATGGAGGTTTGCAGAGGATCCACAACTCAGTTGTTAAATTTTGCGAATGGTGTTGCAAATGGAAGACGTTCGCCAGAGCGTTTGTTTAAAACCCTCAAGATGTTTGAAACATTGCGTGACCTAATTCCAGATTTTGAATTCTTATTTTGTGATCAGTATAGTGTGTCCCTAAGGAATGATGCAATCACGATATGGAAGAGATTGGGGGAATCAATCAGAGGCATTTTCGTGGAGTTGGAGAATCTGATTGGTAGAGATTCGGCTAAGGGGACTGTTACAGATGGTGGTGGTCTTCACCCGATTACCCAGTACGTGATGAATTCCCTCCGTGCGGTTTGCCAATTCTGTCCAACACTAGAGCAAGTGTTTGACGATTCCTCACTTTCTGGGCATATGAATAGGATTATGGACCAATTGGAGAGCAATTTGGAAGAGAAGTCCAAATCCTACGAGGACCCTTCTTTAAGCTATATTTTCTTGATGAATAACCACAAACACATAGTTGAGATGACCAAAGATGCTGAACTAGGAATCCTTTTGGGTGATTTCTGGATTAGAAAACATGCTTTGAAAGTTTTTCACTATCAAAAGACCATGGGCACTATGGCCCCCCCTTTAGTGCAAGATTTATTCCAGTCGACTGATCCTTTTGGATATGTTCAGCCGTTATTGTACAACCCTCAACAGGTTGGTGAGATAGATGGGGAGAATGTGAAAGGAGATGTGCATGAAGCATCACCCTCGCAACCACGAAAAAGGTATCTCAACTTCTTAACTTTATAG 1461 0.4073 MKIKFQLFIVGAGFSYSLIILRSSFSSLDAIARADNEDGNSVTINMNSLQLDSADIASNRIDSPQLVGSDFNSMMDQLETYVKALEQENSNLIEMLLEKVKKYVEEDSQLVLTDPNFMMDALHPETIKGLQETAMLMVTAGFEKEFSDVYNNCRRKCLDECLMHKIFELQKFSIDEVHNMSWLDLKDVIERWIKASNVALKILFHGERRLCDRVFFGFSSSADFSFMEVCRGSTTQLLNFANGVANGRRSPERLFKTLKMFETLRDLIPDFEFLFCDQYSVSLRNDAITIWKRLGESIRGIFVELENLIGRDSAKGTVTDGGGLHPITQYVMNSLRAVCQFCPTLEQVFDDSSLSGHMNRIMDQLESNLEEKSKSYEDPSLSYIFLMNNHKHIVEMTKDAELGILLGDFWIRKHALKVFHYQKTMGTMAPPLVQDLFQSTDPFGYVQPLLYNPQQVGEIDGENVKGDVHEASPSQPRKRYLNFLTL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01395 486 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 422 IPR004140 GO:0000145|GO:0006887
Car02g01395 486 Gene3D Exocyst complex component Exo70 60 439 - -
Car02g01395 486 SUPERFAMILY Cullin repeat-like 45 424 IPR016159 -
Car02g01395 486 Coils Coil 75 102 - -
Car02g01395 486 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 422 - -
Car02g01395 486 Pfam Exo70 exocyst complex subunit 190 424 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01395 Car-Chr2 40613685 40615145 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01395 112 422 EXO70 exocyst subunit family AT5G58430 61.250 4.18e-123 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01395 K07195 - cam:101500706 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01395 02 40613685 40615145 Car02g01395 02 40613685 40615145 ECH