Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01378 ATGAGATACACTTCATCCCTTAGAAGTCCAAAAAAAGAAGAACAAGAAGTACCAGAATCTATCACACCAAACTTTAACAAATCTTACACTCATGAAGATTTCTATCTTTTAGATGAACTAGAAGAGTACTTGAACATTGAGGAAGAACAACAAAAAATTTCACCACAAAATAGTAGTGGTGAGCTTCATTGGGATATCATGGAATGGGACGAATTTAACCGTGTTGGCGATGAAGCAGAATATAGTGAAGAGAAGAATATAAAGAGAGAAAACAATGATGAATTTGGTGAAGTGAATGATGAAAAGAGTGTGGCTTTGAAATTGAATTTGAATTATCAAGAGGTTTTGGATGCATGGTCTGACCGTGGATCTCTATGGGCTGATGGTTGTTCTTCATTGTCTACCAATAATTATGCTTCCTATATGGGAGAAGTACCAATATTGgaagaagagagaagaagaagagaagcaagTGTTCTTAGGTACAAAGAGAAACGTCAAAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTAA 597 0.3384 MRYTSSLRSPKKEEQEVPESITPNFNKSYTHEDFYLLDELEEYLNIEEEQQKISPQNSSGELHWDIMEWDEFNRVGDEAEYSEEKNIKRENNDEFGEVNDEKSVALKLNLNYQEVLDAWSDRGSLWADGCSSLSTNNYASYMGEVPILEEERRRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01378 198 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Car02g01378 198 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 198 - -
Car02g01378 198 Pfam CCT motif 155 197 IPR010402 GO:0005515
Car02g01378 198 PANTHER CCT MOTIF FAMILY PROTEIN 1 198 - -
Car02g01378 198 MobiDBLite consensus disorder prediction 1 26 - -
Car02g01378 198 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01378 Car-Chr2 40412315 40413972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01378 101 197 C2C2-CO-like Transcription Factor Family AT1G73870 44.828 4.40e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car02g01378 CCT 1.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01378 - - cam:101495184 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01378 02 40412315 40413972 Car02g01378 02 40412315 40413972 ECH