Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01375 ATGGGAAAGTGTTGGTTTTATGGGGTTTTGATTGCAGTGGCATGTTTGTGTAATTTTCTTGAAACAAGTGTTTGGGGTGTTGAAGGGTACCCAATTGAGGATCTGGTTGTGAGGCTTCCAGGACAACCTAAGGTTAAATTCAGTCAATATGGTGGCTATGTTGATATTGATGTTAAACATGGTAGAAGTCTCTTCTATTATTTTGTTGAGGCTGACCATCACCCTCACAAAAAACCTCTCACCCTTTGGCTCAATGGAGGTCCTGGATGTTCTTCCATTGGAGGAGGTGCCTTTACTGAATTAGGTCCATTTTATCCTACTGGTGATGGACGCGGTCTACGAAAGAATTCAATGTCTTGGAATAGAGCTTCCAATCTCCTCTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACATCTTCCGATTATAACTCCGGCGATGCCTCCACAGCCGATGATATGGTTTTGTTCTTGCTGAAATGGTATGAGAAGTTTCCTTCATACAAATCAAGGGATCTGTTTCTTACCGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAGCTAATGCTATTCTTGATTATAATGCTCATTCAACCGGTTTCAAATTCAACACGAAAGGAGTCGCAATTGGAAACCCCCTTCTCAATCTGGATCGCGATTCACAAGCAACGTATGATTATTTCTGGTCACACGGAATGATTTCTGATGAAATTGGTCTTGCCATTACGAATGATTGTGATTTTGATGATTATACCTTTGCATCTCCTCATAATATATCTAAATCATGCAACGATGCCATGAACGATGCGAATAAAGTTGTCGGCGACTATATAAACAACTATGATGTGATTCTTGATGTTTGTTATCCATCCATAGTTGAACAAGAGTTGAGATTGAAAAAGATGGCGACTAAAATAAGTATAGGTGTAGATGTTTGTATGAGTTATGAAAGAAGATTCTACTTCAACCTCCCTGAGGTTCAAAAGGCTCTTCATGCTAACCGTACCAATCTGCCTTATCCATGGTCCATGTGCAGTGGTGTTTTAAATTACAGTGATACTGATCCTAACATTAATATGCTTCCAATTCTGAAACGGATTGTTCAAAACCATATTCCCGTATGGGTTTTCAGCGGAGACCAAGATTCTGTTGTGCCATTACTAGGTTCTCGAACACTGATTCGAGAACTAGCTCATGACTTGAAGTTCAAGATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTCGGAGGTTGGGTAACTGAATATGGAAATTTGTTGACTTTCGCGACCGTAAGAGGAGCGGCTCACATGGTACCATATGCACAACCTTCAAGAGCATTGCATCTATTTAGTTCCTTTGTGAATGGTAGGAGATTGCCAAACACAACTCGACCGTCAATTGACGAATGA 1431 0.4095 MGKCWFYGVLIAVACLCNFLETSVWGVEGYPIEDLVVRLPGQPKVKFSQYGGYVDIDVKHGRSLFYYFVEADHHPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRKNSMSWNRASNLLFVESPAGVGWSYSNTSSDYNSGDASTADDMVLFLLKWYEKFPSYKSRDLFLTGESYAGHYIPQLANAILDYNAHSTGFKFNTKGVAIGNPLLNLDRDSQATYDYFWSHGMISDEIGLAITNDCDFDDYTFASPHNISKSCNDAMNDANKVVGDYINNYDVILDVCYPSIVEQELRLKKMATKISIGVDVCMSYERRFYFNLPEVQKALHANRTNLPYPWSMCSGVLNYSDTDPNINMLPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVNGRRLPNTTRPSIDE 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01375 476 Gene3D - 364 463 - -
Car02g01375 476 Gene3D - 317 353 - -
Car02g01375 476 Gene3D alpha/beta hydrolase 32 293 IPR029058 -
Car02g01375 476 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Car02g01375 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 470 IPR001563 GO:0004185|GO:0006508
Car02g01375 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Car02g01375 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Car02g01375 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Car02g01375 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Car02g01375 476 Pfam Serine carboxypeptidase 41 463 IPR001563 GO:0004185|GO:0006508
Car02g01375 476 SUPERFAMILY alpha/beta-Hydrolases 28 470 IPR029058 -
Car02g01375 476 PANTHER CARBOXYPEPTIDASE 6 470 - -
Car02g01375 476 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01375 Car-Chr2 40096798 40100766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01375 323 466 Calmodulin-binding Proteins AT2G22960 25.694 5.49e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01375 K16297 - gmx:100815723 872.463