Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01371 ATGGCAACAGCATTAGAGTGCTGGTCAAgccgcaccaccaccaccgctgccgccgccgccgccgATGAACAACAACAAGTCCTTATGAGAACCCACCACAGATCCGAACTTTCTTCTTCCAAAGACTCTTCCACACTCCTCCAAAAGAACAACAACAAGTTTCACAAACTCACTCGTAACTTCTCTGATGTTATTACTTCCTTCAAAAACACACTTAACCTTAATAATAATAATAATCCTGAATCTCCTCCTTCTTCTAAGAAACTTGCTTGGGCCTCTGTTCTTCGTAATCTTACTCAACTTTATCCTGGAACTCAACTTCCTGATAACCTCATTTCCAATTTGAGGAATCATTACCATTCTCTCCCTCTCAGTTATGCACAAGCTGAATTTGATATGAAGGATGTGTTTCTTCACATCAAGTTGATAGAGCAGGCTTTGGAAAGTGATCAGCCTGCAATTTTGATTCAACAAGAGTGTGGTGGTGGCGGTGATGGTGAGGTTCAGGTTCAGGGGTGTGTGTTGAAGCTAATTTTTGCTTGCAACTCTACCGTTTCGTGGCCTGCTATGTCGGTTGCGTTGGACAGTTTCTCTGTTTGTAGCAAGAGGGCACAGATCTTTGAGAAGAAAGGTTTCACCTTAGGAGTTGTTGCTCTTGTTGTTAGGTCCGGGCATGAAAATTTGGTCAAGACCCGGGTTGAGAATGCTTTGAAGTTTGCTTTAAAGAAGCCTAAAACTGGTGCTGTGAATGTGAAGCTTCCATTTGGACTTTGTGGCTGTCAGGAAGAGAGTTTCATGGGGAGAGAATTAGGGGATATTGGAGAAGATAGTGGTAATGGAAAGGAGTTTGAGAATTCAAGCCAAAAGATTCAGCTTCAGTTGCCTTTGCCTACCTCATCTTTCGTTGTGACAGTGGATGAATGGCAGACGATAAAGTCAGGTGGCGATGAGATTGAGAGATGGTTGTTGAATGCAGATTGTGTTGAGTTTACAGAACAGATTGGACCAAATTCTTACAAAGGTGTCTACATGGGGAAAAGGGTTGGAATTGAGAAGTTGAAAGGGTGCGAAAAAGGAAATTCTTATGAGTTTGAGCTTCACAAAGATCTATTAGAACTGATGACTTGTGGACATAGAAACATTCTGCAGTTCTTTGGTATTGTTGTGGATGATAATCACGGATTATGCGTGGTGACTAAATTCAAGGTACGTGGGTCCGTTAACGCCTTAATGTTGAAGAACAAGAAGCTTCATAGTAAGGATATTGTTAGAATTGCAGTCGATGTAGCTGAGGGGATCAAGTTTATGAACGACCACGGTGTTGCGTACCGAGACCTTAATACACAACGGATTCTGTTAGATAGACATGGAAATGCTTGCTTGGGAGATATGGGTGTAGTCACTGCCTGCAAGAGTGTTGGGGAAGCAATGGAGTATGAAACTGATGGTTATAGATGGCTAGCTCCTGAGATAATCGCAGGAGACCCCGAGAGTGTGACGGAGACATGGATGAGTAACGTTTATAGTTACGGCATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATTTTCTGCACTTTCTCCTGTGCAAGCAGCAGTTGGCATTGCAGCTTGTGGCCTTAGACCTGAAATTCCCAAAGACTGCCAACCAAATCTAAAATACATTATGACAAAGTGTTGGAACAACAACCCTTCTAAACGTCCTAAGTTCTCTGAAATTTTAGCCATATTGCTGCCACCATATAACAATAATAGGTAA 1761 0.4117 MATALECWSSRTTTTAAAAAADEQQQVLMRTHHRSELSSSKDSSTLLQKNNNKFHKLTRNFSDVITSFKNTLNLNNNNNPESPPSSKKLAWASVLRNLTQLYPGTQLPDNLISNLRNHYHSLPLSYAQAEFDMKDVFLHIKLIEQALESDQPAILIQQECGGGGDGEVQVQGCVLKLIFACNSTVSWPAMSVALDSFSVCSKRAQIFEKKGFTLGVVALVVRSGHENLVKTRVENALKFALKKPKTGAVNVKLPFGLCGCQEESFMGRELGDIGEDSGNGKEFENSSQKIQLQLPLPTSSFVVTVDEWQTIKSGGDEIERWLLNADCVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNSYEFELHKDLLELMTCGHRNILQFFGIVVDDNHGLCVVTKFKVRGSVNALMLKNKKLHSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGVVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSYGMVIWEMVTGEAAFSALSPVQAAVGIAACGLRPEIPKDCQPNLKYIMTKCWNNNPSKRPKFSEILAILLPPYNNNR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01371 586 ProSiteProfiles Protein kinase domain profile. 328 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01371 586 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 580 - -
Car02g01371 586 Gene3D Phosphorylase Kinase; domain 1 316 402 - -
Car02g01371 586 SUPERFAMILY Protein kinase-like (PK-like) 315 578 IPR011009 -
Car02g01371 586 Pfam Protein tyrosine and serine/threonine kinase 363 577 IPR001245 GO:0004672|GO:0006468
Car02g01371 586 Gene3D Transferase(Phosphotransferase) domain 1 404 585 - -
Car02g01371 586 PANTHER SERINE-THREONINE PROTEIN KINASE 1 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01371 Car-Chr2 40046939 40051026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01371 311 578 MAP Kinase Kinase Kinase AT2G17700 32.601 3.17e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Car02g01371 PK_Tyr_Ser-Thr 7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01371 - - pvu:PHAVU_008G258400g 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01371 02 40046939 40051026 Car02g01371 02 40046939 40051026 ECH
Car05g01314 05 57017642 57021597 Car02g01371 02 40046939 40051026 PCT