Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01365 ATGCTGAACCAACTCAACTCACTCAACTCGTCCACCAACTCACTGAGTCAACTCACTCAGAACATGTTCTCCGacaacaacaaaaacaacatcatcaTGCTCACAGCCATTGTTTCTCTTCTCCTAGTAATCCTCTTCGTCCTCCTTCTCCACGTGTATGCAAAATTGTTCTTATTTCAACCCAACTCACAATCACGTGCTCGCCGCCGGCAAGCTCCGGCGACCATCTCCGACCTACCAATTCCTTCCAGCTTCCACCACTTCAACATCGAAACCCCACAACCTATTTCAACAAAAGGACTCGACTTTACAGTAGTTTCGACGATTCCCACGTTTGTGTCGGACGAAAAAACAGAGGAATTAGAATGTGTGATTTGTTTGAGTTGTATTGAAGAGGGTGAGATTGGAAGGAAATTACCAAAATGTGGACATGTTTTTCATGTTGAGTGCATTGATATGTGGTTGAATTCACATTGTAATTGTCCCATTTGTAGAGATTCTATTGTTGATGTTGGTGTGATTGAGATTGTGATAGATACTCCAAGTTATGAGAGTGGTTCTGTTTCTGTAACAGAAACTTCTTTGTCTTTGTTTGGTTTCAATTTTAAGAGAATGATAAGTAAAGTTTTTATGTCTTCTAATGTACACGAATTAGATGCTTCACAATGA 669 0.3916 MLNQLNSLNSSTNSLSQLTQNMFSDNNKNNIIMLTAIVSLLLVILFVLLLHVYAKLFLFQPNSQSRARRRQAPATISDLPIPSSFHHFNIETPQPISTKGLDFTVVSTIPTFVSDEKTEELECVICLSCIEEGEIGRKLPKCGHVFHVECIDMWLNSHCNCPICRDSIVDVGVIEIVIDTPSYESGSVSVTETSLSLFGFNFKRMISKVFMSSNVHELDASQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01365 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 170 IPR013083 -
Car02g01365 222 Pfam Ring finger domain 122 165 IPR001841 -
Car02g01365 222 SUPERFAMILY RING/U-box 114 169 - -
Car02g01365 222 PANTHER - 8 213 - -
Car02g01365 222 SMART ring_2 123 164 IPR001841 -
Car02g01365 222 CDD RING-H2_EL5_like 122 165 - -
Car02g01365 222 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 213 IPR044675 -
Car02g01365 222 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01365 Car-Chr2 39945160 39946119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01365 29 168 C3H Transcription Factor Family AT2G42360 37.500 1.34e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01365 - - cam:101493591 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01365 02 39945160 39946119 Car02g01365 02 39945160 39946119 ECH
Car05g01291 05 56637385 56638162 Car02g01365 02 39945160 39946119 PCT