Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01361 ATGGCCGATCCCATACTTGGAGTTGTATTTGAGAATTTGACGTCTCTTCTTCGTAATGAATTTTCCACCCTTTCTGGAATCAAATCAAAGGCTCAAAAGCTATCAACCACCTTAGATTTGATCAAGGCCGTTCTTCAAGATGCTGACCACAGACAACTCACCGACCGCTCTATTATGTTGTGGCTGCAACAACTCAAAGATGCAGTCTACGTGCTCGATGATATTCTTGATCAATTTTCCACTCAATCTCGTCGACTTAGGGGCTCATCCTCTTTCAAACCAAAGAACATCATGTTTCGTCATGAGATTGGAAACAAGTTCAAAGAAATTACACGTAGATTTGATCAGATTGCTGAATGTAAGAACAAGTTTCTTCTACGAGAGGACGTTACTGTTAGGGAAAGCTCAATTGAAGTGGCTGAATGGCGCCAAACCAGCTCCATTATTGCTGAACCCAAAGTATATGGACGAGAAAATGATAAAGACAAGATTGTTGAGTTTCTTCTCACCCAAGCAAGGGACTCTGACTTTCTTTCTGTCTATCCTATAGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTTTCTCAATTGGTCTACAATGATGATAGGGTGAGTAGCAATTTTAATACAAAAATTTGGATTTGTGTTTCTGAGGTTTTTTCGGTCAAGAGGATTCTGTGTTCTGTTATAGAATCTATCACAAGAGAGAAGTGTGATTTTCTGAATTTAGATGTAATACAAAGAAAGGTGCAAGAGTTGTTTCAAGGTAAAAGATATTTGCTGGTTTTGGACGATGTGTGGAACCAAAATCAACAACTGGAATTTGGATTAAGCCAAGAGAAATGGAATAAGTTGAAATCTGTATTGTTGTGCGGATCCAAAGGTAGTTCCATTTTAGTTTCCACCCGTGATGAAGTTGTGGCGGAAATCATGGGAACATGCCAAGCTCACCTTTTGTCAGGTCTCTCTGAAAATGAATGTTGGTTGTTGTTCAAACAATATGCATTTCGACATGATAGAGAAGAGCGTGCAGAGCTTGTGGCAATAGGCAAGGACATAGTTAAGAAGTGTGGTGGATTGCCTCTTGCTGCACAGGCTTTGGGAGGTCTAATGAGCTCAAGGAGCGGGGAAAAGGAATGGCTTGAAATTAAAGAGAGTAAGCTTTGGGCTTTACCACACGAGAATTCTATTTTGCCTGCATTAAGGTTGAGCTACTTTCATCTAACCCCGACCTTAAAGCAGTGTTTTGCTTTTTGTGCCATATTTCCCAAAGGTATGAAAATCATGAAGGAAGAATTGATTCATCTTTGGATGGCTAATGGGTTTATTGCATCTAGGGAAAATTTGGAGGTTGAAGATGTTGGTAGTATGATTTGGAATGAATTATGCCAAAAATCATTCTTTCAAGACATCCAAATAAATGATTATTTAGAAAACATTTCTTTCAAAATGCATGATCTTGTCCATGATCTTGCTCAATCAGTCATGGCGCAAGAATGTATGATTTTGGAGAATGCAAACATGACTAATTTGTCAGAAGGCACACATCATATTAGTTTTCATTCTACTAGTCTGTTATCATTTAATAAGGGTGCCTTCAAAAAAATAGAATCCTTACGGACATTGTTTCAGTTCAATTATTATAAGAAAATAAAACCTAAGTACTTCCCATATAACCATTCTCTTCGGGTTTTATGCACCACCTCTCTCCCGATATCATCACTCGGAAGTTTAATTCATTTGAGGTATTTGGAGCTTCGTGGTCTTGACATAAAAATCTTCCCTGACTCAATTTACAGTTTACAAAATTTGGAAATCTTGAAAATAATAAATTTTGTAAAACTGAGTTGTCTACCGAAGCGCCTGGCTTGCTTACAAAATCTTAGACATCTAGTCATTGAAGGTTGTTATTCATTGTCTCGCATGTTTCCGTACATAGGAAAATTATCTTCTTTAAGAACATTAAGTGTATACTTTGTTAGTTTAGAGGGAGGACATACATTGGCAGAGTTATGTGATCTTAACCTGGGAGGAAAACTGAATATCAAAGGATTACAAAATGTTGGTAGTTTATCTGAAGCTCAAGAGGCCAATTTGATGTGTAAAAAAGACCTCCGTGAATTATGCTTGTCATGGAAAAGCAATTGTGGATTTAGTGAGACCCCTACTATTAGTGCTCAACAAGTACTTGAAGGGCTTCAACCTCACACAAACCTCAAGTG 2222 0.3794 MADPILGVVFENLTSLLRNEFSTLSGIKSKAQKLSTTLDLIKAVLQDADHRQLTDRSIMLWLQQLKDAVYVLDDILDQFSTQSRRLRGSSSFKPKNIMFRHEIGNKFKEITRRFDQIAECKNKFLLREDVTVRESSIEVAEWRQTSSIIAEPKVYGRENDKDKIVEFLLTQARDSDFLSVYPIVGLGGVGKTTLSQLVYNDDRVSSNFNTKIWICVSEVFSVKRILCSVIESITREKCDFLNLDVIQRKVQELFQGKRYLLVLDDVWNQNQQLEFGLSQEKWNKLKSVLLCGSKGSSILVSTRDEVVAEIMGTCQAHLLSGLSENECWLLFKQYAFRHDREERAELVAIGKDIVKKCGGLPLAAQALGGLMSSRSGEKEWLEIKESKLWALPHENSILPALRLSYFHLTPTLKQCFAFCAIFPKGMKIMKEELIHLWMANGFIASRENLEVEDVGSMIWNELCQKSFFQDIQINDYLENISFKMHDLVHDLAQSVMAQECMILENANMTNLSEGTHHISFHSTSLLSFNKGAFKKIESLRTLFQFNYYKKIKPKYFPYNHSLRVLCTTSLPISSLGSLIHLRYLELRGLDIKIFPDSIYSLQNLEILKIINFVKLSCLPKRLACLQNLRHLVIEGCYSLSRMFPYIGKLSSLRTLSVYFVSLEGGHTLAELCDLNLGGKLNIKGLQNVGSLSEAQEANLMCKKDLRELCLSWKSNCGFSETPTISAQQVLEGLQPHTNLK 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01361 740 Gene3D - 6 118 - -
Car02g01361 740 Gene3D - 321 403 IPR042197 -
Car02g01361 740 CDD RX-CC_like 11 119 IPR038005 -
Car02g01361 740 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Car02g01361 740 SUPERFAMILY L domain-like 483 722 - -
Car02g01361 740 PANTHER DISEASE RESISTANCE PROTEIN RP 28 740 IPR044974 GO:0006952
Car02g01361 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 419 IPR027417 -
Car02g01361 740 Gene3D - 404 495 IPR036388 -
Car02g01361 740 PANTHER OS05G0414200 PROTEIN 28 740 - -
Car02g01361 740 PRINTS Disease resistance protein signature 253 267 - -
Car02g01361 740 PRINTS Disease resistance protein signature 623 639 - -
Car02g01361 740 PRINTS Disease resistance protein signature 357 371 - -
Car02g01361 740 PRINTS Disease resistance protein signature 180 195 - -
Car02g01361 740 Gene3D - 137 317 IPR027417 -
Car02g01361 740 Gene3D Ribonuclease Inhibitor 504 740 IPR032675 -
Car02g01361 740 Pfam Rx N-terminal domain 6 100 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01361 Car-Chr2 39881075 39883296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01361 183 646 WRKY Transcription Factor Family AT5G45050 23.033 4.94e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01361 - - mtr:MTR_5g071220 1117.45