Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01359 ATGAGTGACATAGAAGAGAATATGGTGTTTGATGACAACAATGGTGAATCATCTAATGCACTTCAATCCCATATGTTTGAGATCACCGCTGGATCTGACGTTGTTGAGAGTTTGTTCAACTATGCTCAACGTCGAGGTCGGGGTATTTGCATCCTCAGTGGAAACGGAGTAGTGACACATGTCAGTCTCCGTCAATCCACTGGGAGAATTTTACCCCTCCGAGGAAAATTCCAAATTCTATCAATAATTGGGACAGTCCTTCCTCCGCCGATGTCGATGTCGCAGGGCGGTGAAGGACTGTCGGTTTACTTGTCCCACACTGTAGGACAAGTGGTTGGGGGAAATGTTGTTGCACCTCTTATGGCTTCAAGCTCAGTGATTTTAATGGTTGCTTGTTTTGCAGATGCTAAAATTGTAAGGCTACCTTTGGTGGTATGTGATCAAGATGAAGAGGAACCTTCATGCTCAACTGCTGATTCACCACCCAATCCTCCTCGTCTCGCTTGA 507 0.4556 MSDIEENMVFDDNNGESSNALQSHMFEITAGSDVVESLFNYAQRRGRGICILSGNGVVTHVSLRQSTGRILPLRGKFQILSIIGTVLPPPMSMSQGGEGLSVYLSHTVGQVVGGNVVAPLMASSSVILMVACFADAKIVRLPLVVCDQDEEEPSCSTADSPPNPPRLA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01359 168 ProSiteProfiles PPC domain profile profile. 18 154 IPR005175 -
Car02g01359 168 Pfam Plants and Prokaryotes Conserved (PCC) domain 23 133 IPR005175 -
Car02g01359 168 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 150 IPR014476 GO:0003680
Car02g01359 168 CDD DUF296 24 105 IPR005175 -
Car02g01359 168 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 16 150 - -
Car02g01359 168 SUPERFAMILY AF0104/ALDC/Ptd012-like 19 142 - -
Car02g01359 168 Gene3D - 22 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01359 Car-Chr2 39849530 39850204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01359 16 143 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 53.237 2.11e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01359 - - cam:101492939 333.569