Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01358 ATGAGTGAGACAGCAAAGAAAATGGTGATTGATCACAACAACAATGCTACTGAGAGAAGTCAAGAGCTTAACCTATTCATGTTACCCCGATTGGAACTCCAAACCCCGAATATCAATGTCAACCCAAATAACAACCATCACCAACCATCCTCAGTTGTCACTCGCCGCCCTCGAGGGCGTCCACTTGGCTCTAAGAACAAGCCTAAAGCACCTCTTATAGTAAAATATGAAAGCCCCACTACACTCCATTCCCATGTGTTAGAGATCGCTACTGGATCTGACGTGGCAAAAAGTCTCTTTGACTATGCTCAACGTCAAAGTCAGGGAATCTCCATCCTTAGTGGGAATGGAGTGGTGGCACAGGTCATACTTCGTCAATCAACTGGAAGAATTTTACCCCTTATGGGAAGATTCCAAATTATTTCGATATCTGGGACGATCCTTCCTCTTTCGATGTCGCAAGGTGCTGGGGGATTGTCAGTTTACTTGTCACGCACAACAGGACAAGTGCTTGGAGGAACTGTTGTTGCCCCTCTTGTGGCTTTAAGTCCGGTGGTTTTGATTGTTGCTTGTTTTGCAGCTGCTGAAACTGTAAACTTACCTTTGGTGGCACAAGAACCATCATGCTCAACAATTGGAATGAGAAACATTATAAGCAATGATATCAACTATCCCTCATCCCTCCTCGCTTCTAGATACAAAGACCAGTGA 711 0.4459 MSETAKKMVIDHNNNATERSQELNLFMLPRLELQTPNINVNPNNNHHQPSSVVTRRPRGRPLGSKNKPKAPLIVKYESPTTLHSHVLEIATGSDVAKSLFDYAQRQSQGISILSGNGVVAQVILRQSTGRILPLMGRFQIISISGTILPLSMSQGAGGLSVYLSRTTGQVLGGTVVAPLVALSPVVLIVACFAAAETVNLPLVAQEPSCSTIGMRNIISNDINYPSSLLASRYKDQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01358 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 207 IPR014476 GO:0003680
Car02g01358 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 192 IPR005175 -
Car02g01358 236 MobiDBLite consensus disorder prediction 36 68 - -
Car02g01358 236 MobiDBLite consensus disorder prediction 36 52 - -
Car02g01358 236 Gene3D - 83 203 - -
Car02g01358 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 196 - -
Car02g01358 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 43 207 - -
Car02g01358 236 CDD DUF296 85 190 IPR005175 -
Car02g01358 236 ProSiteProfiles PPC domain profile profile. 79 218 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01358 Car-Chr2 39841464 39842174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01358 50 202 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 51.829 4.10e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01358 - - cam:101492608 443.736