Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01357 ATGGCTAAGTCTTCATGGGTGAGAGGCAAGTGTATTGGTAAGGGCGCGTTTGGCTTTGTTAATTTAGCGGTTTCACAAAGCGACGGTAGAGTTTTCGCGGTGAAATCCGTTAATTATAAAACAGGGCTTCCAAATCAGTTAGAAGCTTTGGAGAATGAAATTAGGATTTTGAAACGGTTATCTTCTTCTTCTCCTTCTCCACACGTGGTGGCTTTTCTCGGCGATGATGTCACGTGCGAGGGAGAAGGAACGTCGTCGTTTAAGAATCTTCATTTGGAGTATATGCCAGGTGGCACCGTTACTGACATGGACCGTGCTGACGTGGATGAACGGTTAGTTAGACGCTTCGCTTGGTGTCTGGTTAACGCGCTGAGGGAAGTTCACGCGCGCGGTGTTGTGCACTGTGACGTGAAGGGGAGGAATGTTCTCGTTGCCGGCTCCGCCGTTAAACTCGCCGACTTTGGATCCGCGGTGGAATTTTGCGGCGGAGAATGTTTTAAACCTCGTGGAAGTCCGATGTGGATGGCGCCGGAGGTGATTCGCCGGGAGTATCAAGGACCTGAGTCCGACGTGTGGTCGCTCGGATGTACGGTGATTGAGATTTTCACCGGGAAATTGCCGTGGGAGGATCGAGGCTTCGACACAGTGAATCGAATTGGATTTTCCGACGTGTTGCCGGAGTTTCCAAGCGGTTTATCGGTGGTCGGGCGAGATTTTCTCGAGAAATGTCTGAGTCGAGATCGGAGCCGGAGATGGAGCTGTGATCAGCTGCTTCAGCATCCATTTTTACTTCCGTGTGATAGTGCTATGGAATCGTCACCTCGTTGCGTTTTGGACTGGGTTAACTCGCGATTCACTGAGTCAGAAAACGAGTTCGAAGAAGAAGAAGAAGTAAAGTTGAATAGTAGTGAAAATTCAATTAAAAACAGGATCGGTAAATTAACTACGGCGTTGAGAGGGGTAAATTGGGAAACAGAGGGTTGGGTCGTAGTGAGGGCAATTGAGTCCGAAAAAGAAGCAACAATGTATAATGAAGCGTGTGGGGGCGCAGATGTAGGGGTAATATGGGAATTTGAGAATGTGGTGAGGGTTGAAGAGGGAATGGAGGTAGGGAGTAGTTTGGAATATTCGGATTTTGATGAAAGGGTAAATCGGGAAATGTGGAAGTTGGTGTGGCAGCATGAGTGTGATGAGTGGAAGTACAACTGCAACCGCAAGAACAGCGTTATAGGTGGAAGTGGAAGTTGTTGTGATTGGTCTTGGAGGTGTCGTTATAATCACGGTTCGAAAAAGTTTAATACGATTATCGTTGAAAATTATTAA 1323 0.4747 MAKSSWVRGKCIGKGAFGFVNLAVSQSDGRVFAVKSVNYKTGLPNQLEALENEIRILKRLSSSSPSPHVVAFLGDDVTCEGEGTSSFKNLHLEYMPGGTVTDMDRADVDERLVRRFAWCLVNALREVHARGVVHCDVKGRNVLVAGSAVKLADFGSAVEFCGGECFKPRGSPMWMAPEVIRREYQGPESDVWSLGCTVIEIFTGKLPWEDRGFDTVNRIGFSDVLPEFPSGLSVVGRDFLEKCLSRDRSRRWSCDQLLQHPFLLPCDSAMESSPRCVLDWVNSRFTESENEFEEEEEVKLNSSENSIKNRIGKLTTALRGVNWETEGWVVVRAIESEKEATMYNEACGGADVGVIWEFENVVRVEEGMEVGSSLEYSDFDERVNREMWKLVWQHECDEWKYNCNRKNSVIGGSGSCCDWSWRCRYNHGSKKFNTIIVENY 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01357 440 ProSiteProfiles Protein kinase domain profile. 6 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01357 440 SUPERFAMILY Protein kinase-like (PK-like) 4 281 IPR011009 -
Car02g01357 440 SMART serkin_6 6 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01357 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Car02g01357 440 Pfam Protein kinase domain 8 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01357 440 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Car02g01357 440 Gene3D Transferase(Phosphotransferase) domain 1 3 326 - -
Car02g01357 440 CDD STKc_MAPKKK 5 263 - -
Car02g01357 440 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 357 - -
Car02g01357 440 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01357 Car-Chr2 39817351 39818801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01357 4 341 MAP Kinase Kinase Kinase AT1G07150 58.721 1.21e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car02g01357 Pkinase 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01357 - - mtr:MTR_5g071560 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01357 02 39817351 39818801 Car02g01357 02 39817351 39818801 ECH