Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01356 aTGTCTTGCTCCGTCGCAGTTTCGAATTCGCCGGTGTTTTCTCCGTCATCGTCTCTCTTCTGTTCAAAATCATCAATCATATCTACTTCTTCAGAAACTCTAACTTTGTCTCTCTCTCATCTTAAACCGAGTAACTCTTCAACCACGtcttcttcaccttcttctccttctccctcttctCCGTTTTGTCTTAGGTTACCGAAATTACCCTCGACGGTTTTCGCATCCTCTGCTTCTGCTTCCAACTCTACGTCTCCGAACGGTACCGTTTTGAAGAGGAAGCGACCGACGAGGCTTGATATACCTGTGTGTGTTTCTTCTGTTGGGTTTGGAGTTCCGGCGACGCCTTCTGCGGTGGCGCGTGATGTTGTGGAGAATGAAGAAGATGGTTATTCTATTTATTGTAAGAGAGGGAGGAGGGAGTATATGGAGGATCGTTATACTGCTGGGGATAATCTACGCGGAGAATCCAAATTGGCTTTTTTCGGCGTATTTGATGGGCATGGAGGTGCAAAAGCTGCTGAATTTGCAGCATGTAACTTAGAAAAGAATGTCTTGGATGAGGTTATCATGAGCGACGAAGATGATGTTGAGGAGGCAGTGAAGCGCGGTTACCTCAACACTGATTCTGAGTTCATGAAAGAAGATCTCCATGGTGGCTCTTGCTGTGTAACAGCATTGATTAGGAATGGTAACTTAGTTGTGTCCAATGCTGGTGATTGCCGTGCTGTCATTAGTCGAGGAGGAGTTGCGGAGGCCCTAACATCTGATCACCGACCTTCGAGGGAAGATGAAAGGGACAGAATTGAGACACTGGTAAATTTTCTGACCATTGTAGTGGTTTCTCTTTTATCTGCAGTTTTTTGA 867 0.4383 MSCSVAVSNSPVFSPSSSLFCSKSSIISTSSETLTLSLSHLKPSNSSTTSSSPSSPSPSSPFCLRLPKLPSTVFASSASASNSTSPNGTVLKRKRPTRLDIPVCVSSVGFGVPATPSAVARDVVENEEDGYSIYCKRGRREYMEDRYTAGDNLRGESKLAFFGVFDGHGGAKAAEFAACNLEKNVLDEVIMSDEDDVEEAVKRGYLNTDSEFMKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETLVNFLTIVVVSLLSAVF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01356 288 ProSiteProfiles PPM-type phosphatase domain profile. 130 288 IPR001932 -
Car02g01356 288 SMART PP2C_4 123 281 IPR001932 -
Car02g01356 288 MobiDBLite consensus disorder prediction 40 61 - -
Car02g01356 288 Gene3D - 123 280 IPR036457 -
Car02g01356 288 CDD PP2Cc 130 272 IPR001932 -
Car02g01356 288 SUPERFAMILY PP2C-like 131 272 IPR036457 -
Car02g01356 288 Pfam Protein phosphatase 2C 131 272 IPR001932 -
Car02g01356 288 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 276 - -
Car02g01356 288 PANTHER PROTEIN PHOSPHATASE 2C 3 276 IPR015655 GO:0004722|GO:0006470
Car02g01356 288 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01356 Car-Chr2 39796902 39799931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01356 1 276 PP2C-type Phosphatase Gene Family AT2G30020 60.208 3.99e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01356 K17506 - pvu:PHAVU_008G259800g 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01356 02 39796902 39799931 Car02g01356 02 39796902 39799931 ECH
Car05g01287 05 56581591 56584193 Car02g01356 02 39796902 39799931 ECH
Car05g01287 05 56581591 56584193 Car02g01356 02 39796902 39799931 PCT