Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01355 ATGGAGATTAACATGTTGGGGATGGCTTCCTTCCCTTGCTACACAACACCGAACCGTTCTCATCTTAATCTCAGACAATTATCTATGCGACAAGATTATCCCCTTGCAAGCAAAATCGTTGTTAAAAATTTACCTTATTCTACTGCTGAGACTACTTTACAGAATAAATTTTCAAATTTCGGCAAAATAGCTGAAGTACAAATGGTTAAAGACGTGATCACGAAAAGATCAAAGGGACTTGCTTTTATTCAATACACAAGTCAAGATGATGCCATGCTTGCACTTGAAACCATGGATCAAAAGGTTCAGATTTTAATCGTATTTCGATTATCAAGTCTGACAAGTGAATGTTCTTGTTTTATATTTTTATCCGTTGTCTACAGGATTTTTGCGGCCGGATGA 402 0.3657 MEINMLGMASFPCYTTPNRSHLNLRQLSMRQDYPLASKIVVKNLPYSTAETTLQNKFSNFGKIAEVQMVKDVITKRSKGLAFIQYTSQDDAMLALETMDQKVQILIVFRLSSLTSECSCFIFLSVVYRIFAAG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01355 133 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 15 101 - -
Car02g01355 133 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 99 IPR000504 GO:0003723
Car02g01355 133 Gene3D - 18 110 IPR012677 -
Car02g01355 133 SMART rrm1_1 38 108 IPR000504 GO:0003723
Car02g01355 133 SUPERFAMILY RNA-binding domain, RBD 18 101 IPR035979 GO:0003676
Car02g01355 133 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 101 IPR000504 GO:0003723
Car02g01355 133 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 15 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01355 Car-Chr2 39785880 39789286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01355 37 99 Eukaryotic Initiation Factors Gene Family AT4G34110 38.095 2.70e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01355 - - gmx:100305971 140.584