Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01352 ATGACAGCTATTGAAGAAATGGCTGAAATGTATGTTCTTTACAGTGATAAAACTGGAACTCTCACTTTGAATAAGCTTAATGTTGATAGAAACTTGATTGAGGTGTTTGCTAAGGGTGTAGATAAGAACTTTGTGATACTTTTAGTAGCTAGAGCTTCTAGGATTAAAAATCAGGATGCTATTGATGTTGCAATTGTTGGAATGTTTTCCAACCCACAAGAGGCAATAATTGGTATCAATGGGGTGCATTTTCTTCCATTCAATCATGTAGACAAGAGGACTGCTCTTACCTATATTGATTATGATGGATATTGGCATATATCTAGCAAAGGGGCTCATGAACAAATATTGAATCTTTACAACTACAAAGAGGGTGTGAGGAAAAGGGTCCATGCATCAATTTACAAGCTTAATAGTGCAGAAACAATTCAAAGAGCTTTTGATCTTAGTGTCAATGTCAAGATGATTATTGGGGATCAACTTGCCATCGATAAAGAAGCAAGTAGAAGGCTTGGAATGGGAACAAACATATATCCATCATATGCATTGCCTGGTCAAAACAAAGATGCTTCTACTTCAGATCTTCCTATTGACGAGTTGATTGAGATGGTCAATGGAGTTAAGAAGATTTTTAAATGTAAAATTACTTAG 651 0.3548 MTAIEEMAEMYVLYSDKTGTLTLNKLNVDRNLIEVFAKGVDKNFVILLVARASRIKNQDAIDVAIVGMFSNPQEAIIGINGVHFLPFNHVDKRTALTYIDYDGYWHISSKGAHEQILNLYNYKEGVRKRVHASIYKLNSAETIQRAFDLSVNVKMIIGDQLAIDKEASRRLGMGTNIYPSYALPGQNKDASTSDLPIDELIEMVNGVKKIFKCKIT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01352 216 PANTHER PLASMA MEMBRANE ATPASE 1 137 - -
Car02g01352 216 PANTHER PLASMA MEMBRANE ATPASE 138 211 - -
Car02g01352 216 PRINTS P-type cation-transporting ATPase superfamily signature 14 28 - -
Car02g01352 216 PRINTS P-type cation-transporting ATPase superfamily signature 149 159 - -
Car02g01352 216 Gene3D - 11 25 IPR023214 -
Car02g01352 216 Gene3D - 138 207 IPR023214 -
Car02g01352 216 PANTHER CALCIUM-TRANSPORTING ATPASE 1 137 - -
Car02g01352 216 PANTHER CALCIUM-TRANSPORTING ATPASE 138 211 - -
Car02g01352 216 Gene3D - 1 10 - -
Car02g01352 216 Gene3D - 26 137 IPR023299 GO:0000166
Car02g01352 216 ProSitePatterns E1-E2 ATPases phosphorylation site. 16 22 IPR018303 -
Car02g01352 216 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 20 137 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01352 Car-Chr2 39673860 39674633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01352 1 211 Primary Pumps ATPases AT2G24520 57.937 1.74e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01352 K01535 - gmx:100785442 270.396