Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01342 ATGAAGCTATTGGcatcatcttattcatcatcatcaccgtcatcatcatcaacatTTAGCTTTGACCCATTTTTTAGAAGCTCAAAAACTGCTTCTTTAGGGTGTCTCACAACAATTTTTCACAGGGTTCTCTGTTCTGGTGGTCTTCCAACACACCCATCAGATCAAATTAAAGAATTTCACTCAAACTTCATTGAAAGTGAAAAAGTTCAAATTTTGAAGACTAATActtcttcttcttcttcttcttcttcttcttcttcttcttctCCTGGAATAGTTGCAAGGTTAATGGGTTTGAATTCAATAGCAGAGAAAGAGATAGGTGAGGTTCCAATTCCACCAGCTTTTCATTTGGTTGAAAATGAAAACTTTTTGGTGTTCAGTTTTGAAAGTAAAGAAGAATTCAAGTCCAAAGGGAGAAGAAGAAAAGAAAAGGGTTGTGTTGAGTTGAAGGTGAAAAGAGAAGAGAAAAACAAGAGAGGTTCTTCTGATATGTGTTGTGTGAATGTGGGAAGTGATGGTGAATTTCAATTTGAGAACAGTTTGTTTAAAGAAGTTGGAAATGGTGGTGAGAAAGTGAAGAAGAGAAAGAAGGGGAAAACATGTGTAGAAAAGAAAGTTGAAAGTGAATGCTGTTCAGAAGATTCTAGTCCTGTTTCTGTCTTTGATTTTGAGCGTGATGCTTCTGGAACAGAGGGAGGTCTTTGTGATGTTGGTATAAGTTGGAGAAGAAAATTGTCACCGGTACTTGAAAATGACCAGCTCTTCATTCTACATTCTGATAGTAATTTGATGAATGAAGAGAATGAAGTTAAGGAAATTGAGAACAACATGGATGAAGGAACAAAGAAAAAAGAGAGACAAAACCAAGAGTATGTAGATATTTGGAGTAAAATTTGCAGGCTAGTTGAAGATGAATTGGTTGGATCAAATCAATTGCAAGAAGTAAAGAGGAAACAAAGTGATTTTGAAAGTATAAGTGCTGATTTTGAATCAGAGATTTTAAATCACTTGTTAGATGAGCTTATAGATCAACTTGTTTGTAACCCTTTGAAAGCATTGCAAATTTAG 1074 0.324 MKLLASSYSSSSPSSSSTFSFDPFFRSSKTASLGCLTTIFHRVLCSGGLPTHPSDQIKEFHSNFIESEKVQILKTNTSSSSSSSSSSSSSPGIVARLMGLNSIAEKEIGEVPIPPAFHLVENENFLVFSFESKEEFKSKGRRRKEKGCVELKVKREEKNKRGSSDMCCVNVGSDGEFQFENSLFKEVGNGGEKVKKRKKGKTCVEKKVESECCSEDSSPVSVFDFERDASGTEGGLCDVGISWRRKLSPVLENDQLFILHSDSNLMNEENEVKEIENNMDEGTKKKERQNQEYVDIWSKICRLVEDELVGSNQLQEVKRKQSDFESISADFESEILNHLLDELIDQLVCNPLKALQI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01342 357 Pfam DUF761-associated sequence motif 78 103 IPR032795 -
Car02g01342 357 PANTHER - 1 106 - -
Car02g01342 357 PANTHER - 177 355 - -
Car02g01342 357 PANTHER - 115 184 - -
Car02g01342 357 Coils Coil 258 292 - -
Car02g01342 357 PANTHER OS05G0128300 PROTEIN 115 184 - -
Car02g01342 357 PANTHER OS05G0128300 PROTEIN 1 106 - -
Car02g01342 357 PANTHER OS05G0128300 PROTEIN 177 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01342 Car-Chr2 39511930 39513541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01342 28 347 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 28.836 8.33e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01342 - - lja:Lj2g3v2277510.1 286.189