Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01332 ATGAGTTTCTTCAATACATCACGACCAATTTCCACCATGAATGAAGATTTGGAGAACAATGAAGAGACATTACAACAAAACATGTCATCAAGTTCATTGGTGAGAAAGAAATCAGATATGGTTTTGGTCACAAATATTAATGTTCGGTTCCAAATAGTTAGAAGTTTCATGAGTAATATGAAAGTGGTCATCTTTGGCACTAAGCTTGTTGTGCTTTTTCCGGCTGTCCCTTTAGCGGTTGCTGCTGATTTTTATAACATTGGAAGGCCTTGGATTTTTACATTGAGTCTGCTTGGACTTGCTCCCCTAGCTGAACGTGTTAGCTTCCTCACTGAGCAAATTGCATATTTTACCGGCCCAACAGTTGGAGGACTTTTAAATGCAACTTGTGGTAATGCAACCGAGATGATCATAGCAATATTAGCACTTCATCAGAACAAAATACATGTTGTGAAGTTGTCCTTGCTGGGTTCCATTCTCTCAAACCTTCTTTTGGTTCTAGGCAGCTCACTCCTTTGTGGTGGCTTAGCAAATCTTAAGAGGGAGCAAAGATATGACAGAAAACAAGCAGATATAAATTCATTGCTTTTGTTGCTTGGTTTGCTGTGCCATTTGCTGCCATTAATGTTCAAATATGCCTTGGCTGGTGGAAATCATTCTATTGCCAATGCTACTCTTCAATTGTCAAGAGCAAGCAGCATTGTTATGCTTCTAGCATATGTTTCATATATCTTCTTCCAATTGAAAACTCATCGAAAATTATTTGAGGCACAAGAGAaagaagaagaagatgatgaagatgaagagaaAGCAGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTGGGTATGACACTTGTCATATCTGTGCTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGAATTTCTGTTAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGGAACGCTGCTGAACATGCTGGTTCGATCATATTTGCTTTCAAGAACAAGTTGGACATATCCTTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATAAGAATGGATCTGGACTTCAATCTTCTTGAAACTGGATGTCTTGCTTTTGCAGTCATTGTTACAGCCTTCACTTTACAGGATGGAACATCACACTATATGAAAGGAGTAGTTCTTTGTCTATGTTACATTGTCATTTCTGCATGTTTTTTCGTTCTCAAAGCTCCACAAATCAACCAATATGGTATGGTCAATTTAGGAGCTAAACCATCCTTTGATGCCATCGCCATTTGA 1344 0.3795 MSFFNTSRPISTMNEDLENNEETLQQNMSSSSLVRKKSDMVLVTNINVRFQIVRSFMSNMKVVIFGTKLVVLFPAVPLAVAADFYNIGRPWIFTLSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALHQNKIHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADINSLLLLLGLLCHLLPLMFKYALAGGNHSIANATLQLSRASSIVMLLAYVSYIFFQLKTHRKLFEAQEKEEEDDEDEEKAVIGFWSAFTWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFNLLETGCLAFAVIVTAFTLQDGTSHYMKGVVLCLCYIVISACFFVLKAPQINQYGMVNLGAKPSFDAIAI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01332 447 PANTHER VACUOLAR CATION/PROTON EXCHANGER 15 431 - -
Car02g01332 447 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016021|GO:0055085
Car02g01332 447 Pfam Sodium/calcium exchanger protein 278 418 IPR004837 GO:0016021|GO:0055085
Car02g01332 447 Gene3D - 269 422 IPR044880 -
Car02g01332 447 Gene3D - 120 262 IPR044880 -
Car02g01332 447 TIGRFAM caca2: calcium/proton exchanger 55 421 - -
Car02g01332 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 15 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Car02g01332 447 TIGRFAM cax: calcium/proton exchanger 74 421 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01332 Car-Chr2 39319251 39324232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01332 26 427 Antiporters AT2G38170 68.059 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01332 K07300 - gmx:100802344 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01332 02 39319251 39324232 Car02g01332 02 39319251 39324232 ECH