Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01324 ATGGTAAGAGGAGGAAATCATGGTGGTAATGGCGTTAAGATCTTTGGTTATGAAAATATAAATGCTAATGACCCTTTCATGGAAAGATTCTTATGGGACCAAATGATCCACTACCATAGCCATCAACAAAATAATTCAAGTGTTTTTCCTTACTCTAGTGGTTCACACTATGAGTATAAGTGGCCAAACACTCAAGAATCAAGATTTGTTATTGATCATGGTGTGTTACCAAATGAAGAGCCTTTGATGTGGACTAACTTCAACCAAACATCCACATTGTGCCTTAAGGATATTCATGGTTATGAAAAAAACACCAAAATTGTGAGAAGGAAAATCAAGAAAGAGACTTCTATAATTTCGATCAAAGGACAATGGACAAAGGAAGAAGACAGGAAATTAATAAGGTTTGTGAAGCAATATGGTGAAAGAAAATGGACTCAAGTAGCAGAGAAGTTAGAAGGAAGGGTTGGCAAGCAATGTAGAGAGCGATGGAATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATATTAGTAGCTAGCCATGCCAAACTTGGAAATCGTTGGTCTGAGATAGCAAAGAGGATTCCAGGAAGAACAGAAAATTCCATAAAAAACCATTGGAATGCCACTAAAAGAAGACAAAACTCTAGGAGAAAGAACAAGAGGAATGAAAATAGTTCAAAGGGAAAACCTAAGTCTTCTATACTTGAAGACTATATCAAAACCAACACCTCAATCCCAACCAAAATTACCACTATACCCTCTTCCTCTCATACAACACTTTCCCAAAACCTTGCAACAAATGATGAATCAAACCCTTTGTCCATTGAACCCATGAATGAATCTTTTTCCAATGACCTACTATTCATGCAACAACTTTTGATGGGTAATGATCAAAATGTTGTTGAAGCCTCTTCTAAGCAATCTAAGATGTCTTCATCACCCTCATATTTTGATTTTTGTCAAGATAATGTTGTTGATGGTGATGTGAATGAGAGTGGGATTGTTTATTCAAACCAACCTCCAAATGACAACATTATGCAATTGGATGATGATAATGTTGTTTTTAGCCCTAGAGAGACTTCTACTATTACAAATGATTTCCTTCCTTATGATTTTTACTTTTCTCAATTGCTGAATTTATAG 1170 0.3564 MVRGGNHGGNGVKIFGYENINANDPFMERFLWDQMIHYHSHQQNNSSVFPYSSGSHYEYKWPNTQESRFVIDHGVLPNEEPLMWTNFNQTSTLCLKDIHGYEKNTKIVRRKIKKETSIISIKGQWTKEEDRKLIRFVKQYGERKWTQVAEKLEGRVGKQCRERWNNHLRPDIKKDSWSEEEERILVASHAKLGNRWSEIAKRIPGRTENSIKNHWNATKRRQNSRRKNKRNENSSKGKPKSSILEDYIKTNTSIPTKITTIPSSSHTTLSQNLATNDESNPLSIEPMNESFSNDLLFMQQLLMGNDQNVVEASSKQSKMSSSPSYFDFCQDNVVDGDVNESGIVYSNQPPNDNIMQLDDDNVVFSPRETSTITNDFLPYDFYFSQLLNL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01324 389 CDD SANT 125 168 IPR001005 -
Car02g01324 389 Pfam Myb-like DNA-binding domain 125 183 - -
Car02g01324 389 ProSiteProfiles Myb-like domain profile. 122 168 IPR001005 -
Car02g01324 389 PANTHER MYB TRANSCRIPTION FACTOR 3 388 - -
Car02g01324 389 MobiDBLite consensus disorder prediction 205 245 - -
Car02g01324 389 Gene3D - 176 244 - -
Car02g01324 389 ProSiteProfiles Myb-like domain profile. 169 219 IPR001005 -
Car02g01324 389 SUPERFAMILY Homeodomain-like 121 215 IPR009057 -
Car02g01324 389 Gene3D - 121 173 - -
Car02g01324 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 172 IPR017930 -
Car02g01324 389 CDD SANT 176 219 IPR001005 -
Car02g01324 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 173 223 IPR017930 -
Car02g01324 389 SMART sant 173 221 IPR001005 -
Car02g01324 389 SMART sant 121 170 IPR001005 -
Car02g01324 389 PANTHER MYB PROTEIN-RELATED 3 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01324 Car-Chr2 39250791 39253504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01324 113 250 MYB Transcription Factor Family AT5G58850 68.966 7.68e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car02g01324 Myb_DNA-bind_6 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01324 K09422 - gmx:102668713 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01324 02 39250791 39253504 Car02g01324 02 39250791 39253504 ECH