LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car02g01316	ATGGGTTTGAATGCAAGGGACATTCAACTTCATTTGTTTAGAGTTATTCATATTTCGATTGGAAAGAGCTTTACTTTTATGAAAAAGCATCCAAAAGTTTCATGTGCTTTGTTAGTCTTCTTCATAATGTATATATTTCTTTCTTGTATATACAATTTGTTGCTTTTCTTGTCTCCATTTCTTGTGTTTACTTCAATTTTGGTCAGAATTTTTTGGAGTTCTGAGCAAACAAATATTGGATGTGTGGAGAAAAATGGAGAGGAAAAAAGGGTTGAAGCAAAAAATCTACCTAATATGGTTCTCAAGAATGAGAGACGTGGAAAACTTTATAAGTATCCGTCACATAATGCAACAAGTAGAAGAAGAAATTTCACTAGGAAGAAATTAGATGTCTACGGTGATTTAGAACAAAAAGCTAAGGATTTATCAGCGGTGTTTCGAAATGACTTTACTAAAAAGAACACGGAAATTCGTTCAGGATTAAAATTTTTGGAGAAAGAAATGGACCCTTTGGATTATAAGTTTTTAGAAAGAAAAAGAGTTGAGGCTCCTGAAAAGCCATTAATGATTTCTGAACCTTCAATGGTTGACCTGGTGACTTGTAGTGCAAGTAATGATGGTCAAGAGAAAAGGACAGAGAAAATAGAAGATGAGAAAAAGGCAATAGAAGATAGTAATAATAAAGGTGTGGAAATTAAAGAGGATGATCAAAAAAAGCTAATGGATCTTGGAATTAGTGAAATGGAAAGCAACAAAAGGTTGGAGAGTCTTATAGCTAGAAGAAGGGCAAGAAAACaattgaaattggagattgagaatggtttaattgatattgaaTCAATTTCTCCAAGCCAAATTGCACCATTGCTCATTTCAAGAATTAACCCTTTTGATTCTCCAAGAGATTTTGATGACATAGAAATGCCTGGTTCTGCTCCAACTGCTTTGAGAAGTCCATTTGATATTCCCTATGAACCTTTTGAAGAGAAACCAAACCTCAAGGGGGATATTTTTTATCATGAATTCGCAAATGACTTGCCATTAGAACTTAGACAAGACCTTGAAGCAAGAGAGAACAAACTAGCAAACCAAAGACTTAGAAGGCTTTCAGGTATGGGAAATCATGATAGGCCTGAAAAGTTAAACTCCAAAGAAGGAAGTGAAAGTGAATTACAAGCTTCCAATCCATCAAATGAAGGAGAGGAAACAACACATGAAGAGGAAGGGAAATGTAAAATTGATATGGTTGGCATGAAAAGTGAGGAAGTAGACAATGGTGATCCAACAAATTCCATCTCAAACAATGCAAGTGAGCCAATAACAAATGTTGAAAGCATTATAACTGCTTCTCCTAAGCCTCAAGTGGAAGTTCTTGATTTTCCAATATCTACTGCTAATGTTTCTACTATAAATGATTCATTATATGAATCTCTTTCAACTCCTGTTGATGTGAATGAAGGAAACATGTTATTTACAAAGGGACTAATATGTCATACACCATCATGTTCCTTAGCTTCTGACTTACAAGTTGAGTTTTCTGAAATTGGTTCACCAACACTCACAATTGATGAGAGCCATGAGAACTTTACATTCACAGATGGTGAATATCATGTTGATAAAGATCTTAATTCTTTACATAACAATGATGAAGAAAATGCAGCTGATGTGAGTTCTATGGCCTCAAAATCTGAAATACTTTATGATACTCCAATTTATGCAATGAGTAGTGATCATAATAACATATTGGATAATGTGAGACAAACTAGTTCATCTCAATATTCTTCCGATGTATTAGCACGTTGGAAGCGGTTGATGCGGTTGATGGATACTCGCGTTAATCATTTACCTAGTGAAATACTTTCAGAAAATCTGAAGGAAAGTAACCAGATAGATAATCTAATAAACAAGGAACAAGTTGTCAATGATGTGAATAACTCAGAAGCTACTAAGCAAGACAACACAGAGGACTTAAGGTGTAATGAAGAGCCTGGTGCATCAGGTGTGAGACAAGAAGCAACTGATGAAATCTCAACcaactcaagttcaacatcatcatcatcaccaaGTTCTGTATTGCCGATACAACAGAAGACAACAACAGATCAAGAGATACACATAGGTGTTCAACAATCTGACATGGAAGATGTGGCACAAGAAATAGTAAACGGTGAAGGTCCACTTGATTCCATGTCTCAAAATATTCATCCTTTCATGGATGATCCACATGTTGAATCGCATAACAATGATTTGGACCATTCTCAGGAAAGAACTAATCCCTTGGAGAACTCCATTCAAGAATCAAATATGTCCAACAACATGAATAATGCAGAAGTTTGTAATCAAGAGGACCAAAAGTTAAAGAATGATGAGAAAAGTGAAGACAAATTTACTCCCCAGGGTATACAGGATGCTTCAGCAGAACCACATAGACCAGCAGAGGTGCCATTGATTCCTCCAATTCTAGAATCATCATCAGAAATTCACATAGAGAATGAAGGAAAGTCCCAAGCATCATCGAGACACCCATTTATCAATGATGAAGAAGTAGTAGACACAAGTTCTTCTAAAGATTTTGAAGAAAAACACAATGACTTGAATGAAAATGAAGGCTTACTCTCATCTTGCATTTCATCACAGGAAAGCGATAAATCGAGCGAAAATCATAGCTCGAAAGAAGAGAACTATTTGCAGAGTGAGTTAAATCAGATGGTTATAGGGCATATAGAAAAGGAACAGTTGGACAAAGGCGATATCTCTGAAGATTTTTCAATGCCAACGGTCACTGAAGTAACCAATGCTGAAGACACATTAGGAGAACCTGACAAGATGAACAAAAGTGAAACCACTGATCAAGAATTGCACAAAAATAATCAAACCATGGTTTTATCAGATGAAGAAACTGATAAGGAAGGAACTTATCCTTTGGAGAACTCCATTCAAGAATCAAGTATGTTCAAGAATATGAATGGTGCAGAAGTTTGCAATCAGGAAGACCAAAAGTTAAAGAATGATGAAATCAGTGAAGACAAAATCACTTCCCAAAGTAGACAGGATGCTTCAGCAGAACCACATAAACTAGAAGAGGTTCCAACGATTTCTCCAATGATAGAATCATCATTAGAAATTCACATAGAGAATGAAGGAAAATCCCAAGATTCATTGAGACAACCATTTATCAATGATGAAGTAGTAGACACAAGCTCTTTTAATGATTTTGAAGGAAAACACAATGACTTGAATGAAAATGAAGGCTTACTCTCATCTTGCATTTCATCACGGGAAATAGATATATCGAACGAAAATCATAGCTCAAAAGAAGAGAACTTTTTGCAAAATGAGTCAAATCAGGTGGTTATAGATGATACAGAAAAGGAACAGTTGGACAAAGGTGATATCTCTGAAGATTCTTCACTACCAATGGTCACTGAAGTAACCAACGCGGAAGACACATTAGGAGAATATGATAATATTAACAAGAATGAAATCACTGATCAAGAATTGCACAAAAATAATCAAACCATGGTTATTTCTGAACTAGATGGAGAAACTGATAAAGTTAGCAACATAGCACACGTGAATGATCCTTAA	3588	0.3481	MGLNARDIQLHLFRVIHISIGKSFTFMKKHPKVSCALLVFFIMYIFLSCIYNLLLFLSPFLVFTSILVRIFWSSEQTNIGCVEKNGEEKRVEAKNLPNMVLKNERRGKLYKYPSHNATSRRRNFTRKKLDVYGDLEQKAKDLSAVFRNDFTKKNTEIRSGLKFLEKEMDPLDYKFLERKRVEAPEKPLMISEPSMVDLVTCSASNDGQEKRTEKIEDEKKAIEDSNNKGVEIKEDDQKKLMDLGISEMESNKRLESLIARRRARKQLKLEIENGLIDIESISPSQIAPLLISRINPFDSPRDFDDIEMPGSAPTALRSPFDIPYEPFEEKPNLKGDIFYHEFANDLPLELRQDLEARENKLANQRLRRLSGMGNHDRPEKLNSKEGSESELQASNPSNEGEETTHEEEGKCKIDMVGMKSEEVDNGDPTNSISNNASEPITNVESIITASPKPQVEVLDFPISTANVSTINDSLYESLSTPVDVNEGNMLFTKGLICHTPSCSLASDLQVEFSEIGSPTLTIDESHENFTFTDGEYHVDKDLNSLHNNDEENAADVSSMASKSEILYDTPIYAMSSDHNNILDNVRQTSSSQYSSDVLARWKRLMRLMDTRVNHLPSEILSENLKESNQIDNLINKEQVVNDVNNSEATKQDNTEDLRCNEEPGASGVRQEATDEISTNSSSTSSSSPSSVLPIQQKTTTDQEIHIGVQQSDMEDVAQEIVNGEGPLDSMSQNIHPFMDDPHVESHNNDLDHSQERTNPLENSIQESNMSNNMNNAEVCNQEDQKLKNDEKSEDKFTPQGIQDASAEPHRPAEVPLIPPILESSSEIHIENEGKSQASSRHPFINDEEVVDTSSSKDFEEKHNDLNENEGLLSSCISSQESDKSSENHSSKEENYLQSELNQMVIGHIEKEQLDKGDISEDFSMPTVTEVTNAEDTLGEPDKMNKSETTDQELHKNNQTMVLSDEETDKEGTYPLENSIQESSMFKNMNGAEVCNQEDQKLKNDEISEDKITSQSRQDASAEPHKLEEVPTISPMIESSLEIHIENEGKSQDSLRQPFINDEVVDTSSFNDFEGKHNDLNENEGLLSSCISSREIDISNENHSSKEENFLQNESNQVVIDDTEKEQLDKGDISEDSSLPMVTEVTNAEDTLGEYDNINKNEITDQELHKNNQTMVISELDGETDKVSNIAHVNDP	1195

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	642	696	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	365	386	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	671	696	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	739	755	-	-
	Car02g01316	1195	PANTHER	CARDIOMYOPATHY-ASSOCIATED PROTEIN	566	962	-	-
	Car02g01316	1195	PANTHER	CARDIOMYOPATHY-ASSOCIATED PROTEIN	959	1192	-	-
	Car02g01316	1195	PANTHER	CARDIOMYOPATHY-ASSOCIATED PROTEIN	1	549	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	724	755	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	1008	1027	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	783	812	-	-
	Car02g01316	1195	PANTHER	DENTIN SIALOPHOSPHOPROTEIN	566	962	-	-
	Car02g01316	1195	PANTHER	DENTIN SIALOPHOSPHOPROTEIN	959	1192	-	-
	Car02g01316	1195	PANTHER	DENTIN SIALOPHOSPHOPROTEIN	1	549	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	365	411	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	783	797	-	-
	Car02g01316	1195	Coils	Coil	205	225	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	830	869	-	-
	Car02g01316	1195	MobiDBLite	consensus disorder prediction	844	867	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car02g01316	Car-Chr2	39193599	39200820	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car02g01316	-		-	cam:101495508	2296.16

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car02g01316	02	39193599	39200820	Car02g01316	02	39193599	39200820	ECH
	Car05g01192	05	54790260	54795019	Car02g01316	02	39193599	39200820	PCT