Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01315 ATGGCAGAGGGCTTGCTTAGTGTTGTTTTTGAGAATTTGGTGTCTCTTCTTCAAAATGAATTTTCAACCATTTCTGGTATCAAGTCAAAGGCTCAAAAGCTGTCAACAACCTTAGATCTCATCAATGCCGTTCTTGAAGATGCTGAGCATAAACAACTCACTAACCGTTCTGTCAAGGTATGGCTTCAACAACTCAAAGATGCAGTTTACGTGCTTGATGATATTCTTGATGAATGTTCCATTGAATCTCATCGTTTTAAGGGCTTAGCTTCTTTTAATCCAAAGAACATCATGTTTCGCCGTGATATTGGTAACAAGTTCAAAGACATTTCAAGTAGATTTGATGAAATTGCTGAAAGTAAGAACAAGTTTGTTCTACAAGTGGGTGGTGGTACTATTACGGAAAGGTCCATTGAAGTTGCTGAGTGGCGCCAAACCACCTCAGTTATTGCTGAGCCTAAAGTTTACGGACGAGAAGATGATAAAGAGAAGATTGTCATGTTTCTTCTCAACCAAGCAAGGGTCTCTGACTTCCTTTCTGTGTATCCTATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTTGCTCAATTGCTCTACAATGATCATCGGGTAAGCATCAATTTTGATACAAAAGTTTGGGTGTGTGTTTCTGAGGTTTTCTCGATAAAGAGGATTCTTTGTTCCGTTATAGAATCTATCACAAGCCAAAATTGTTATGACTCCAATTTAGATGTCATACAAAGAAAAGTGCAAGAACTGTTGAAAGGTAAAAGATTTTTTATGGTTTTGGATGATGTATGGAAAAGAAATCAGGAATTGGAATTCGGATTAAGCCAGGACAATTGGAATAAATTGAAATCTGTGTTGTCTTGTGGATCCAAAGGTGCTTCCATTTTAGTTTCCACTCGTGACAAGGATGTCGCTGAAATCATAGGAACATGCAAAGCTCATTATCTATGTGGTCTCTCTGATGATGAATGTTGGTTGTTGTTCAAACAATATGCATTTGGACATGATAGAGAAGAGCGGGAAGGGCTTGTCGCAATAGGCAAGGAGATCGTAAAGAAGTGTGGGGGATTGCCTCTTGCGACACAAGCATTGGGAAGTTTAATGCGCTCAAGAAGTCAAGAAAATGAATGGCTTGAAATTAAAGAAAGTGAGCTTTGGACTTTACCTGACGAGAATTTGATTTTGCCTGCCTTGAAATTGAGCTACTTGTATTTAACACCAACCTTGAAGCAGTGTTTCGCCTTTTGTGCAATATTTCCTAAAAATACTAATATGATGAAGGATGAGTTGATTCATCTTTGGATGGCTAATGGATTTATTTCATCTAGGGAAAATTTGGAGGTTGAAGATGTTGGAAATATGGTTTGGAATGAACTGTGCCAAAAGTCATTCTTCCAAGACATCAAGATGGACGCTGATTCTGAAGACGTTTCTTTCAAGATGCACGATCTTGTCCATGATCTTGCTCAGTTTGTTACAGGGCCAGAGTGTATGATTTTGGACAACAAAAACACAGATTTGTCAAGAAACACTCACCATATTAGTTTTGACTATCCCACTATGCTATCTATCAATGAGGGTGCCTTTGAAAGAATTGAATCCTTGCGAACAATGTATGTGTTAAAACATTATGGCTACAACTCGTTTGATTATAGACGGTTCCCAAGAAACATCTCTCTGCGGGTTTTACGCATAGAATGTTCAATGTTATGTTCAATTGAGAATTTTACTCATTTGAGGTATTTGGAGCTTTATGGTTTCTCAACCCTTGAGGATATATCTGACTCACTTCACACCTTGCGGAATTTGGAAGTCTTAAAATTTAGAAGGTTTTGGAAAATTGGATGCCTGCCAAAACACTTGAGTCGCTTACAAAATCTCAGACACCTTGTCATCGATGATTGTAATGAATTGTCTGGTCTCTTCCCTAATATTGGAAAGTTATCTTGCCTAAGAACATTAAGTGTTTTCATTGTTGGTCGACAGACAGGGTACAGCTTGACAGAGCTACAAGATCTAAAGCTGGGAGGCAAATTGAGCATCGAAGGGCTAAAAAACGTTGACAGTTTATCTGAAGCTCGAGATGCCAATTTGATGTGTAAAAAAGACCTCATAGAATTATGCTTGTCATGGAGCAGGACTGAAAGATTTACTGAGGGTCTTATTATTAGTGCAGAGCAAGTAATCGAAGCACTTCAACCTCACTCAAATCTTAAGAGGTTGAAAATAGATCTCTATGACGGATCATGTTTACCAAGTTGGATCAGAATTCTGAGTAGTTTAGTTTCTCTTGAACTTTCGGGTTGTGTGAACTGTGTGCAACTTTCACCACTTGCCAAACTACCATCTCTAAAAAAACTCAATTTACGCCGGATGGATAATGTGCAGTACGTGGATGATGATGAACCTCGCCATGGTGTAGAGGTGGAGGCTTTTCCATCTCTGGAGGAACTCTCATTAGATGGGTTACCAAACTTAGAGCAGTTGTTGAAAGTGGAAAGAGGAGAGATGTTCCGTCATCTTTCTAATTTAACCATCATACATTGTCCTAAACTTGTTTTGCCACACCTTTCGTCTGTTAAATATCTATTTGTAGATGGATGTAACAACGAGTTACTGAGGCAAATCTCTAGTTTCTATGGTCTTACTACTCTTCACCTTAATAGAAATGAAGATGTCACTTCCCTCCCAGAGGGGATGTTGAGAAACCTGACTTCTCTTCAAACTCTGACAATATCTGATTTCCTCAAATTGATGGAATTACCAAATGAACCCTTCAACCTAGCTTTGGAGCATCTATGTATCAATCGTTGTGGCCAGCTTGAGTCTTTACCAGAGCAAATTTGGGAAGGTCTGCAATCCCTTCGAACCATTGATATTGTTGAATGTGAAGGATTGAGATCCTTGCCGGAAGGTATCCGACACCTCACTTCACTTGAGGTTTTGACTATTCATGGATGTGAAGGATTGAGATCCTTGCCGGAAGGTATCCGACACCTCACTTCACTTGAGGTTTTGACTATTCATGGTTGCTCAACATTAAAGAAGCGATGCGAGAAGGAAATAGGGGAGGACTGGGACAAGATAGCACACATTCCAAAGTTACTGATTTGGTAG 3129 0.3928 MAEGLLSVVFENLVSLLQNEFSTISGIKSKAQKLSTTLDLINAVLEDAEHKQLTNRSVKVWLQQLKDAVYVLDDILDECSIESHRFKGLASFNPKNIMFRRDIGNKFKDISSRFDEIAESKNKFVLQVGGGTITERSIEVAEWRQTTSVIAEPKVYGREDDKEKIVMFLLNQARVSDFLSVYPIVGLGGVGKTTLAQLLYNDHRVSINFDTKVWVCVSEVFSIKRILCSVIESITSQNCYDSNLDVIQRKVQELLKGKRFFMVLDDVWKRNQELEFGLSQDNWNKLKSVLSCGSKGASILVSTRDKDVAEIIGTCKAHYLCGLSDDECWLLFKQYAFGHDREEREGLVAIGKEIVKKCGGLPLATQALGSLMRSRSQENEWLEIKESELWTLPDENLILPALKLSYLYLTPTLKQCFAFCAIFPKNTNMMKDELIHLWMANGFISSRENLEVEDVGNMVWNELCQKSFFQDIKMDADSEDVSFKMHDLVHDLAQFVTGPECMILDNKNTDLSRNTHHISFDYPTMLSINEGAFERIESLRTMYVLKHYGYNSFDYRRFPRNISLRVLRIECSMLCSIENFTHLRYLELYGFSTLEDISDSLHTLRNLEVLKFRRFWKIGCLPKHLSRLQNLRHLVIDDCNELSGLFPNIGKLSCLRTLSVFIVGRQTGYSLTELQDLKLGGKLSIEGLKNVDSLSEARDANLMCKKDLIELCLSWSRTERFTEGLIISAEQVIEALQPHSNLKRLKIDLYDGSCLPSWIRILSSLVSLELSGCVNCVQLSPLAKLPSLKKLNLRRMDNVQYVDDDEPRHGVEVEAFPSLEELSLDGLPNLEQLLKVERGEMFRHLSNLTIIHCPKLVLPHLSSVKYLFVDGCNNELLRQISSFYGLTTLHLNRNEDVTSLPEGMLRNLTSLQTLTISDFLKLMELPNEPFNLALEHLCINRCGQLESLPEQIWEGLQSLRTIDIVECEGLRSLPEGIRHLTSLEVLTIHGCEGLRSLPEGIRHLTSLEVLTIHGCSTLKKRCEKEIGEDWDKIAHIPKLLIW 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01315 1042 Pfam NB-ARC domain 158 386 IPR002182 GO:0043531
Car02g01315 1042 Pfam Rx N-terminal domain 6 97 IPR041118 -
Car02g01315 1042 CDD RX-CC_like 2 119 IPR038005 -
Car02g01315 1042 Gene3D - 6 118 - -
Car02g01315 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Car02g01315 1042 PRINTS Disease resistance protein signature 181 196 - -
Car02g01315 1042 PRINTS Disease resistance protein signature 254 268 - -
Car02g01315 1042 PRINTS Disease resistance protein signature 358 372 - -
Car02g01315 1042 PRINTS Disease resistance protein signature 1002 1018 - -
Car02g01315 1042 Gene3D - 405 495 IPR036388 -
Car02g01315 1042 Gene3D Ribonuclease Inhibitor 859 1029 IPR032675 -
Car02g01315 1042 Gene3D Ribonuclease Inhibitor 666 858 IPR032675 -
Car02g01315 1042 Gene3D Ribonuclease Inhibitor 507 663 IPR032675 -
Car02g01315 1042 Gene3D - 138 317 IPR027417 -
Car02g01315 1042 PANTHER DISEASE RESISTANCE PROTEIN RP 28 948 IPR044974 GO:0006952
Car02g01315 1042 PANTHER OS05G0414200 PROTEIN 28 948 - -
Car02g01315 1042 SUPERFAMILY RNI-like 816 1028 - -
Car02g01315 1042 Coils Coil 31 51 - -
Car02g01315 1042 Gene3D - 322 404 IPR042197 -
Car02g01315 1042 SUPERFAMILY L domain-like 484 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01315 Car-Chr2 39169183 39173823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01315 184 649 WRKY Transcription Factor Family AT5G45050 23.314 2.47e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01315 - - mtr:MTR_5g071220 1286.94