Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01305 ATGCAAATGAAGAAATCATCAAGCACCAATTTGCATCAATCTAGTCAAAGAAAAAAGAATGCTAATTTTCAAGATGATATAGGAACTGATTCCACAAAGAGGCAAAATCCTAAGACTCATTCAGCACTGAAAAGTTTCAAGTCTGCTATCAAGAAATGTGCAGATGTTTTTGCTTTAATTCTCAGTGGCAAAAGAAAAACAGCTTCAAAAGTTAGTATTGGAAGTGATGGGAGAAAGCATACATCAAAAGCTAGATTGGTTGTATCATCTTCAACTGATTTATCATCTGATAGTAACAACAAGAATTCATCAAAATGGAAATTTTCTTCTTCCTATGCATCATCTAGTACTACAAGTGGACAACTTGGAATTGGGAACTTCACTTTTGATGAAATTTACAAGTCAACTGCAAAATTCTCTCCTGATAATCAAATTGGGGAAGGTGGATTTGGAATTGTCTATAAAGGAAAGCTTAATGATGGAACTATTGTTGCAGTGAAGCGTGCCAAGAAGGAAGCACTGCAGAGTCACCTATATGAGTTCAAGAATGAAATTTACACTCTATCAAAAATTGAGCACCTAAATCTTGTGAGGTTATATGGATATTTGGAGCATAGAGATGAAAAGCTTATTGTTGTTGAGTATGTTGGTAATGGAAATCTTAGAGAACATTTAGATGGTGTCTGCGGTGATGGACTAGAAATCGGTGAGCGTTTAGACATCGCAATTGATGTAGCTCATGCGATAACTTATCTTCATATGTACACAGATAATCCAATTATACACAGAGACATCAAAGCATCAAACATCTTAATTAGTGAGAATCTAAGGGCTAAAGTGGCAGACTTTGGTTTTGCAAGGTTGTCTGATGATCCTGGTGCAACTCATATTTCAACACAAGTTAAAGGAACAGCTGGTTATATGGATCCTGAGTACTTGAGAACTTATCAACTCACAGAAAAGAGTGATGTTTATTCATTTGGTGTATTGCTTGTTGAAATGATGACGGGACGACATCCGATAGAACCGAAGAAACTACTTGATGAGAGAGTGACAATCAGATGGGCAATGAAGATGTTGAAGAAAGGTGATGCTGTGTTTGCCATGGATCCAAGACTGAGAAGAAGCCCAGCCTCCATCAAAGCAGTGAAGAAGGTTTTCAAGCTAGCTTTTCAATGCCTTGCACCTTCCAAACAATCAAGGCCACATATGAAGAATTGTGCAGAGGTTTTGTGGGGTATCAGAAAAAATTTTAAAGATGAAATCACTCCTCTTCCTACCTTACCTTCTCATCAATCTGAAAATTTTCCTCAAAGAGAAAAGAATAAGCATATGGTATTTGGTATTGAAGATGATGATAGCTACAAATTTTCCTCAGCACCTAATCATATTCATTAA 1398 0.3655 MQMKKSSSTNLHQSSQRKKNANFQDDIGTDSTKRQNPKTHSALKSFKSAIKKCADVFALILSGKRKTASKVSIGSDGRKHTSKARLVVSSSTDLSSDSNNKNSSKWKFSSSYASSSTTSGQLGIGNFTFDEIYKSTAKFSPDNQIGEGGFGIVYKGKLNDGTIVAVKRAKKEALQSHLYEFKNEIYTLSKIEHLNLVRLYGYLEHRDEKLIVVEYVGNGNLREHLDGVCGDGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILISENLRAKVADFGFARLSDDPGATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEPKKLLDERVTIRWAMKMLKKGDAVFAMDPRLRRSPASIKAVKKVFKLAFQCLAPSKQSRPHMKNCAEVLWGIRKNFKDEITPLPTLPSHQSENFPQREKNKHMVFGIEDDDSYKFSSAPNHIH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01305 465 ProSiteProfiles Protein kinase domain profile. 139 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01305 465 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 25 441 - -
Car02g01305 465 SMART serkin_6 139 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01305 465 PIRSF ILK 2 56 - -
Car02g01305 465 PIRSF ILK 126 423 - -
Car02g01305 465 Gene3D Transferase(Phosphotransferase) domain 1 217 425 - -
Car02g01305 465 PANTHER RECEPTOR-LIKE PROTEIN 55 25 441 - -
Car02g01305 465 CDD STKc_IRAK 145 411 - -
Car02g01305 465 SUPERFAMILY Protein kinase-like (PK-like) 114 415 IPR011009 -
Car02g01305 465 Pfam Protein tyrosine and serine/threonine kinase 142 411 IPR001245 GO:0004672|GO:0006468
Car02g01305 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Car02g01305 465 MobiDBLite consensus disorder prediction 1 41 - -
Car02g01305 465 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Car02g01305 465 MobiDBLite consensus disorder prediction 84 119 - -
Car02g01305 465 MobiDBLite consensus disorder prediction 82 119 - -
Car02g01305 465 Gene3D Phosphorylase Kinase; domain 1 97 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01305 Car-Chr2 39035060 39038730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01305 111 404 Receptor kinase-like Gene Family AT1G79620 43.522 1.81e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Car02g01305 PK_Tyr_Ser-Thr 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01305 - - lja:Lj2g3v2222900.1 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01305 02 39035060 39038730 Car02g01305 02 39035060 39038730 ECH
Car02g01305 02 39035060 39038730 Car05g00901 05 48168735 48172104 PCT