Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01301 ATGGAAGCTAAACGCGGCGCCGTGCAGACCCTAGTATCAAACCTAAGCTCCGTTTCCGAACGAACCCGCATTAACGCTCTTTGCGAGCTTCGGACAATGTCAATGAAAGACCCGGAAACCCGACCCGTAATTTCCGAAGCAGGTACGATTCCTTACCTCGTTGAAACTCTCTATTCTTCTTCACACCCAGCGCAACAAAACGCCGCATCAACGCTTCGAAACCTTTCCCTAACAGAAAAAGAAACTATCATGTCCACGCGCGGTATCCTCGACGCGCTTGCGCACGTTATCTCTCATCATTCTTCTACCTCCTCCGCCGCTGCCGTTCAAGCCTCCGCCGCTACTATCCATCATCTTCTTTCCAGAGTTGATGATTACCGTACTGTTGTCGGATCCAAACGCGAGATCGTTTACGCTTTAATCGATATCCTCCGTTGCCATCATTCCTCGCCGCCGCGCACAGTAAAAAACGCGTTGAAAGCGCTTTGCGCAATCGCGCTTCATCCGTTAAACTGCGCCTTCATGGTTCAGTTCGGTGTCGTTTCCGATCTTTTCTCTCTCGTCGTCAATGACCGTAGGGTAGGGATATTAGAAGACGCAACTTCCGTCATTGCGCAGGTTGCCTGCTGCGATGAAAGTCTTGAGGCCTTCCCTAAGGTCTCCGGCATTAAGTTACTCACCGATCTACTCCATTTTCCTAACGACTTTAGCATAAGGACAATGGAAAATGCTGTGTGCGCGCTGCTCAATCTTGTCCGATGTGGCGGAGATGCGATGGCTGGCAATGTTAGAAACTATTTTTTAAATAAGTATGATGGAATAGTCTATGTTATAGATGATGGTAGCTCAAAGATGAAGAAAATGGCTACGGAGCTGTTGCAGGTGTTGCTTGATGAATTTGGCTTCTCTAAAATGCCACATTGCAACTATTCATGA 936 0.4808 MEAKRGAVQTLVSNLSSVSERTRINALCELRTMSMKDPETRPVISEAGTIPYLVETLYSSSHPAQQNAASTLRNLSLTEKETIMSTRGILDALAHVISHHSSTSSAAAVQASAATIHHLLSRVDDYRTVVGSKREIVYALIDILRCHHSSPPRTVKNALKALCAIALHPLNCAFMVQFGVVSDLFSLVVNDRRVGILEDATSVIAQVACCDESLEAFPKVSGIKLLTDLLHFPNDFSIRTMENAVCALLNLVRCGGDAMAGNVRNYFLNKYDGIVYVIDDGSSKMKKMATELLQVLLDEFGFSKMPHCNYS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01301 311 SMART arm_5 210 253 IPR000225 GO:0005515
Car02g01301 311 SMART arm_5 37 77 IPR000225 GO:0005515
Car02g01301 311 SMART arm_5 168 209 IPR000225 GO:0005515
Car02g01301 311 SMART arm_5 122 167 IPR000225 GO:0005515
Car02g01301 311 PANTHER U BOX DOMAIN-CONTAINING 2 300 - -
Car02g01301 311 Gene3D - 1 170 IPR011989 -
Car02g01301 311 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 300 - -
Car02g01301 311 SUPERFAMILY ARM repeat 5 297 IPR016024 -
Car02g01301 311 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
Car02g01301 311 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 48 76 IPR000225 GO:0005515
Car02g01301 311 Gene3D - 173 297 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01301 Car-Chr2 38875256 38876400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01301 8 256 U-box Gene Family AT2G23140 33.200 3.44e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01301 - - mtr:MTR_8g039560 365.54