Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01291 ATGAAAGTTATGACCTTTTCTTGTGGCATAACAAAACCCAATTTTCTGATTTCCCAAACAGAAATGCCAATTTTAACTTTTGGTCATTCCAAGTTGAGTGCTACCCTAGCTCTTCAATTGCCATGTAATTGTGTTAGGAAGATGAGGTTGATTACAAAGCTTCACTGTTCAGTTGCTGATAGGACATATAGTTCTAGAACCGGTGATTCCCGGGGTTCCAAACGGGACTCCGGTGAAATTCAGAAGAAGCGGGGAGGCCCCTCGTCGTTATACGTTGGTTATATTCGTCCCAGTTTATCTGAAATGAAGAAAGATAAGGCCACATTACGCGAAAAGGTTTACGAGTTTTTGCGTGGGATTGGCATTGTTCCTGATGAGCTTGATGGTCTTGAACTTCCTGTTACAGTTGATGTTATGAAGGAGCGTGTGGATTTTCTTCACAACTTGGGGCTTACAATTGAAGACATTAACAACTATCCTCTTGTTCTTGGCTGCAGTGTCAAGAAGAACATGGTTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTAAGGAAAACCACACTAACGCAGTTTTTGCGGAGATATCCGCAAGTTCTTCATGCTAGTGTGGTTGTGGATCTGGTGCCAGTGGTCAAGTATCTTCAGGGGATGGATATCAAACCCAATGATGTTTCTCGTGTTCTTGAGAGGTATCCTGAAGTACTAGGATTCAAACTTGAGGGAACCATGAGTACATCGGTTGCTTATTTGATTGGAATTGGTGTTGGAAGAAGAGAAATCGGAGGTCTCTTAACTAGATACCCGGAGATTTTGGGAATGCGAGTTGGTAGAATCATCAAGCCTTTTGTAGAGTATTTGGAGAGCTTGGGTATTCCAAGGCTAGCCATTGCTAGACTGATAGAGACACAACCTTATATTCTTGGATTCGATTTGGACGAAAGAGTGAAGCCAAACGTCAAATCCCTTGAAGAGTTTAATGTTCGGCGAACATCACTTGCCTCAGTAATCGCTCAGTATCCTGACATCATTGGAGCTGAACTAGAGCCAAAGCTAGCCAACAAGAGAAGTGTCCTGAATTCTGTTATTGATTTGGATCCTGAGGATTTTGGCTTAATAGTGGAGAAGATGCCGCAAATAGTTAGCCTCAATAGTACACCTATGTTGAAGCATGTTGATTTTCTTAAGGATTGCGGGTTTTCCTTGCAGCAAATGAGGAAGATGATTGTGGGATGCCCTCAACTACTTGCTTTAAACACTGACATCATGAAACTTAGCTTTGATTACTTCCAAAAAGAAATGGAAAGGCCTTTGGAAGATTTGGTTACATTCCCTGCATTCTTCACTTACGGTCTCGAGTCAACTATAAAACCTAGGCATAAGATGGTTGCCGAGAAAGGATTGAAGTGTTCTCTGGCATGGATGCTTAACTGTTCTAATGAGAAATTCGAGCAACGAATGGACTATGATACTATCGACATGGAAGAGATGGAAATGGAATCATCATTTGACATGAATTCACTGATGCAACCAAGGAGCGACGAGTCAGATTCTGATTATGAAGAAAGTGACGACGATGACGAGTAA 1584 0.4179 MKVMTFSCGITKPNFLISQTEMPILTFGHSKLSATLALQLPCNCVRKMRLITKLHCSVADRTYSSRTGDSRGSKRDSGEIQKKRGGPSSLYVGYIRPSLSEMKKDKATLREKVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLHNLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKTTLTQFLRRYPQVLHASVVVDLVPVVKYLQGMDIKPNDVSRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRREIGGLLTRYPEILGMRVGRIIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDERVKPNVKSLEEFNVRRTSLASVIAQYPDIIGAELEPKLANKRSVLNSVIDLDPEDFGLIVEKMPQIVSLNSTPMLKHVDFLKDCGFSLQQMRKMIVGCPQLLALNTDIMKLSFDYFQKEMERPLEDLVTFPAFFTYGLESTIKPRHKMVAEKGLKCSLAWMLNCSNEKFEQRMDYDTIDMEEMEMESSFDMNSLMQPRSDESDSDYEESDDDDE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01291 527 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 33 516 - -
Car02g01291 527 Gene3D Transcription termination factor 3, mitochondrial 97 204 IPR038538 -
Car02g01291 527 Gene3D Transcription termination factor 3, mitochondrial 273 492 IPR038538 -
Car02g01291 527 SMART mt_12 333 365 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 225 256 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 370 400 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 189 220 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 SMART mt_12 437 468 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 Pfam mTERF 175 483 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 PANTHER CGI-12 PROTEIN-RELATED 33 516 IPR003690 GO:0003690|GO:0006355
Car02g01291 527 MobiDBLite consensus disorder prediction 499 527 - -
Car02g01291 527 MobiDBLite consensus disorder prediction 63 89 - -
Car02g01291 527 MobiDBLite consensus disorder prediction 67 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01291 Car-Chr2 38639274 38642632 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car02g01291 mTERF 1.3e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01291 K15032 - gmx:100785223 780.785