Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01287 ATGCAAATTTTATCAAGAATCGTTTTGGTTCAAGGCACTTACACTTTTGCACTCATTGCATATCGTTATATTGCTGCTGCAATTTGTGTTGCTCCCTTTGCACTCTATTTTGAAAGAGGAAGGCCAAAGAAGTTCAATTGGAGAGTTTGGTTATGGCTTTTCGCCAACGCATTAGTTGGGATGACCATGGCTCCAGGACTATTCTATTATGGTCTTCGAGACACATCTGCCACTTACGCGGTTAACTTGCTCAACATGGTTCCTATTTTCACATTTTTTATCTCTATCATATTCAGAATGGAGAATTTGAAGATTGGAACATGGGTTGGTAAAGTGAAATGTATTGGTGCAATATTATGTGTTGGTGGGGCATTAACTACAAGTTTATACAAAGGGAAGGCATTTTATATTGGTCATCATAGTCTTCAAGATGCTCAGATGGTTAGTGCTGTTGCAGCACATCAAACTCATAAGCTTCGTGGCACTCTCTTTTTGGTTGGAAGCTGTTGCTCATACACTGCTTGGTTTGTTATTCAAGTAAAGTTGATGAAAGTTTTTCCATTGAGGTATTGGGGAACAATGTTATCATGTGTTTTGTCAGCAATTCAGTCAGCAATAATAGGCGTATGCATAAATTCTAGTGAAGCTGCTTGGAGATTAGAGTGGAATCTACAACTCTTTACTATAGTGTACTCGGGAGCAATGGGCAATGCAGCTACATTTTGTTTAATATCATGGGCAATATCAATTAAGGGTCCTACTTACCCTCCAATGTTTAATCCACTATCTCTTGTTTTTGTGGCAATATCAGAAACTATCTTTCTTGGCGAACCACTAACAATGGGAACGTTGTTCGGAACGGTTTTGATTATAGTGGGATTGTACTCCTATTTGTGGGGTAAAACAAATGACGGGTCAAGTTTACCTGAAACAAATGTAGCAGTTTTTGAATTATCAACGAACATGATTGAAGACCCTTCTATAGTTCAATCAACAGCTGTAGTAGTACCAAGTTCTTCTATAGTTGAATCAACAGCTGTAGTAGTACCAAGTTCTTCAAATTGA 1065 0.3812 MQILSRIVLVQGTYTFALIAYRYIAAAICVAPFALYFERGRPKKFNWRVWLWLFANALVGMTMAPGLFYYGLRDTSATYAVNLLNMVPIFTFFISIIFRMENLKIGTWVGKVKCIGAILCVGGALTTSLYKGKAFYIGHHSLQDAQMVSAVAAHQTHKLRGTLFLVGSCCSYTAWFVIQVKLMKVFPLRYWGTMLSCVLSAIQSAIIGVCINSSEAAWRLEWNLQLFTIVYSGAMGNAATFCLISWAISIKGPTYPPMFNPLSLVFVAISETIFLGEPLTMGTLFGTVLIIVGLYSYLWGKTNDGSSLPETNVAVFELSTNMIEDPSIVQSTAVVVPSSSIVESTAVVVPSSSN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01287 354 Pfam EamA-like transporter family 160 296 IPR000620 GO:0016020|GO:0016021
Car02g01287 354 Pfam EamA-like transporter family 5 121 IPR000620 GO:0016020|GO:0016021
Car02g01287 354 PANTHER WAT1-RELATED PROTEIN 1 306 - -
Car02g01287 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 301 - -
Car02g01287 354 PANTHER WAT1-RELATED PROTEIN 1 306 IPR030184 GO:0016021|GO:0022857
Car02g01287 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01287 Car-Chr2 38544842 38552593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01287 1 301 Nodulin-like Gene Family AT1G09380 34.426 1.68e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01287 - - vra:106763417 452.21