Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01284 ATGTCTTCCATAAACTATATCTTTCTCATATTTTGCTTGTTCAATCTAGAAACACATCTAGTATCAGTTCATTCTTCATCTAGTGATGTTCCAATCAATGTAACCAAACACTTCTCCTTCCCAAACTTCATCAATAACCCCAAAATACTTCATGATGTAAAGCTTCTAGGAAGTGCAAAGTTCTCAAATGAAAAGGGTTCACTTCAAATCCCAAATGAATCACAAGACACAGGTATAAGACATCAAGCAGGTAGAGGTTTATATTCCTTCCCAATCCGTTTGTTAGATCCAACTACAAAAATACCAGCTTCTTTTCAAACCACCTTTTCATTTCAGCTTAATAATTCAACTACTGATGTAAAAAGTGACTATGGTGGTGGTAGTGGACTTGCCTTCATTATAGTACCTGATGAATTTACTGTTGGAAGACCAGGTCCTTGGCTTGCTATGCTTAATGATGCATGTGAGAATGATTATAAAGCAGTTGCAATTGAGTTTGATACTAGAATGAATCATGAATTTGGAGATCCAAATGATAACCATGTTGGCATTAATTTAGGTACTATAGTATCTGATAAAATTATCAATCTTTCTGATTTTGGTGTGTCCCTTAAAGATGGTTTTGTTCATCATGCTTGGATTAACTATGATGGTCCTCAAAAAAGAATGGAAATTTTTCTTGGACTTGCTAATCAAGAAGTTATTCCTACTAAGCCTATTTTCTCAGAAATTATGGATCTTTCTCCTTTTCTAAATGAGTATATGTTTGTAGGATTTTCAGCTTCAACAGGTAAGATCTTGCTTGAGAATACTTCCACAGAAACAACAGCTACTACCAAGAAGTCTAGTAAGGACGAAACTCCGCGAAGCTTTTTGATTTTCGTGGCTGCTGTAGTATTGTCTTTGGTTGCTTTAATTTGTTTTTACTTTATCAGTAAGTATAGAAGAAGTGCTGCTAAATCAAAGAGTTCAATAGATGAAGAGATTCATAGGCCAAGGCCTCCTAACAAACCACGGCGCTTCGCTTTTTCCGAACTTTCCTCTTCGACTAGATCATTCAGTGAGATAGAGGTACTTGGAAGTGACTTAAGAGGAGTGTACTTCAGAGGAAAGCTTGGTAATGGAAACCAAGTAGCATTGAAAAGATTCTCAACTCAGTTTCTCAACACGCACGGGGCGGATAAGAAGCGTTTGTTGAAGGAAATCAAAGTCATCAGCCATGTTCGCCACCCGAATTTACTTCCTATAAAAGGCTGGTGTCAAGACAAAACCGAAATCATCGCAGTCTACGAGTTTGTCCCGAACGGTAGTCTAGATAAATGGCTATTCGGGGCTGGTGTTCTTCCGTGGACACGGAGGTTCAAAGTCATTAAAGACGTAGCCGACGGCTTGAGTTTCCTTCACAATAAACAACTAGCACATAAGAACTTGAAATGCAGTAGTGTGTTTCTTGATGTCAGCTTCCGAGCTGTATTGGGAGACTTTGGGTTCGTTCTAATGGGAGCAGAGTCGAAACAGTTTGAATTAGCAGTGTGTAATGGCGCTGATGTGTTTGAGTTTGGTATTTTTGTGTTGGAAGTGATAGGTGGAAGACCAAGAGTGGAAGAAATGGATGAAGAAAAACAAGATGAGAGGAACTTATTGGATTTTGCATGGAATTTGCATGAGACTAATGAGAAAGTGAAGCTAGTAGACAGAAGAATGGGATCATTGATCAACTTGGAGCAAGCAATTCATGTTATGGAAATTGGGTTGCTTTGTACTTTGAATGAGAACAAAGGAAGACCTTCTATGGAACAAGTTGTGGAGTTTCTTCATGACATGGAGAAGCCTATTCCTGAATTACCAAGAACTCGCCCTGTTGCTTTGTTTCCTTATAACAGTGCCAACACTGGACTTTGCAATAATTACTCCTGCAGTTTGAAGCTGTGA 1932 0.3851 MSSINYIFLIFCLFNLETHLVSVHSSSSDVPINVTKHFSFPNFINNPKILHDVKLLGSAKFSNEKGSLQIPNESQDTGIRHQAGRGLYSFPIRLLDPTTKIPASFQTTFSFQLNNSTTDVKSDYGGGSGLAFIIVPDEFTVGRPGPWLAMLNDACENDYKAVAIEFDTRMNHEFGDPNDNHVGINLGTIVSDKIINLSDFGVSLKDGFVHHAWINYDGPQKRMEIFLGLANQEVIPTKPIFSEIMDLSPFLNEYMFVGFSASTGKILLENTSTETTATTKKSSKDETPRSFLIFVAAVVLSLVALICFYFISKYRRSAAKSKSSIDEEIHRPRPPNKPRRFAFSELSSSTRSFSEIEVLGSDLRGVYFRGKLGNGNQVALKRFSTQFLNTHGADKKRLLKEIKVISHVRHPNLLPIKGWCQDKTEIIAVYEFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHNKQLAHKNLKCSSVFLDVSFRAVLGDFGFVLMGAESKQFELAVCNGADVFEFGIFVLEVIGGRPRVEEMDEEKQDERNLLDFAWNLHETNEKVKLVDRRMGSLINLEQAIHVMEIGLLCTLNENKGRPSMEQVVEFLHDMEKPIPELPRTRPVALFPYNSANTGLCNNYSCSLKL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01284 643 PANTHER - 276 623 - -
Car02g01284 643 Gene3D Transferase(Phosphotransferase) domain 1 433 506 - -
Car02g01284 643 PANTHER - 8 265 - -
Car02g01284 643 Pfam Legume lectin domain 36 270 IPR001220 GO:0030246
Car02g01284 643 CDD lectin_legume_LecRK_Arcelin_ConA 37 264 IPR001220 GO:0030246
Car02g01284 643 Pfam Protein tyrosine and serine/threonine kinase 359 498 IPR001245 GO:0004672|GO:0006468
Car02g01284 643 ProSiteProfiles Protein kinase domain profile. 353 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01284 643 SUPERFAMILY Protein kinase-like (PK-like) 330 605 IPR011009 -
Car02g01284 643 Gene3D Phosphorylase Kinase; domain 1 323 432 - -
Car02g01284 643 Gene3D Transferase(Phosphotransferase) domain 1 507 621 - -
Car02g01284 643 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 276 623 - -
Car02g01284 643 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 8 265 - -
Car02g01284 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 265 IPR013320 -
Car02g01284 643 Gene3D - 35 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01284 Car-Chr2 38447215 38449239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01284 37 624 Receptor kinase-like Gene Family AT5G55830 31.346 1.92e-84 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Car02g01284 Lectin_legB 9.2e-49 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01284 - - lja:Lj2g3v2196570.1 952.199