Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01281 ATGGGATCCTTAAACAATTTAGCTTACTCAAAACGACTCTTCTTTCTACCAATTTTCATGTTAGTTGTCCCCACCTTCCTAGTAGTGGCAAGGACCTATGGTGAGAATAAGGTGGTTGCATCAATGCACAAATATCAACATCTTTTTGAGCTAGATGACAACGGTTATCCAAAGTGGTTTTCAACGCATGATCGTATGTTGTTGTCCCAGCTCCAAGAAGGAGATTTGGTTCAACCCAATGTTATAGTGGCTAAAGATGGTAGCGGTCAATTTACAACGATTACTGAAGCTATCAACTCATACCCTGATAATTATCAAGCCACCTTTGGTGAAGATTTCACTGCAATGTCAATTGCATTTGAGAACGCAGCTGGTCCCGAAGGTGAGTCAGCAATAGCGCTTTTGGTTGAAGGTGATCGATCATCATTCTTCAATTGTGCATTTCTTGGTTACCAGGACACGTTGTGTGTAAGCAAAAACCGTCAATTCTACCGCAATTGTGAGATATATGGAACCATTGATTTCATTTTTGGTGAGTCGACTACCTTGATACAAAACTCGAAGATCCTTGTGAGGAAGCCCTATAAAAAACAATATAATGTTATAGTGGCAGATGGCACGTACCAGAGCATGTCCCCTACTGGAATAGTCATCCAAAATTGCTTCATCATGCCAGACCCTGAACTCTTACCTTATTTATCAACAGTGAAGACTTATTTGGCAAGACCATGGAAAGCATATTCAAGGGTTGTCTTCATTAATAATTACATTGATGATTTTATTCAACGAGATGGGTTTATAATTTGGCACTATGATACTCCGAACACTGAAAACTCTTACTTTGCTGAGTATGGCAATAGTGGACCTGGTGCCGATACTACATCAAGGGTAAAATGGGCAAAAGGTCTCATTACTCAAGATGAGGCTGCTAGATTTATCGCTGACTCGTGGCTTGATGCTAGCACTTGGTTGCCTTTCACCAACATTCCTTATGATTCTTGCTTTTAG 1008 0.4028 MGSLNNLAYSKRLFFLPIFMLVVPTFLVVARTYGENKVVASMHKYQHLFELDDNGYPKWFSTHDRMLLSQLQEGDLVQPNVIVAKDGSGQFTTITEAINSYPDNYQATFGEDFTAMSIAFENAAGPEGESAIALLVEGDRSSFFNCAFLGYQDTLCVSKNRQFYRNCEIYGTIDFIFGESTTLIQNSKILVRKPYKKQYNVIVADGTYQSMSPTGIVIQNCFIMPDPELLPYLSTVKTYLARPWKAYSRVVFINNYIDDFIQRDGFIIWHYDTPNTENSYFAEYGNSGPGADTTSRVKWAKGLITQDEAARFIADSWLDASTWLPFTNIPYDSCF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01281 335 PANTHER PECTINESTERASE 47 108 - -
Car02g01281 335 SUPERFAMILY Pectin lyase-like 77 331 IPR011050 -
Car02g01281 335 Gene3D - 108 335 IPR012334 -
Car02g01281 335 Pfam Pectinesterase 107 319 IPR000070 GO:0030599|GO:0042545
Car02g01281 335 PANTHER PECTINESTERASE 107 333 - -
Car02g01281 335 Gene3D - 40 107 IPR012334 -
Car02g01281 335 PANTHER PECTINESTERASE 107 333 - -
Car02g01281 335 ProSitePatterns Pectinesterase signature 2. 169 178 IPR033131 -
Car02g01281 335 PANTHER PECTINESTERASE 47 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01281 Car-Chr2 38406404 38407673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01281 48 330 Carbohydrate Esterase AT2G47030 36.390 9.99e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01281 K01051 - gmx:100808559 310.842