Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01261 ATGACAGTGAAAAACTCCAGCTACCAAGGGTTAAACACTTTTCAAAGTGATAATCAAAGGTACGAGCTCGGTCGTCAGCTAGCAAGCACTAAATTATCAAGCAACAAGACAATCAGAAGGATCCGTGTTCGAGGTGGTAATGTGAAGTGGAGAGATCTTAGATGGGATACCGGTAACTTCTCATGGGGCAGTGAAGCAGTAACTCGCAAGACTCGTCTTCTGGATATGGTTTACAATGCCTCAAATAACGAGCTCGTCCGAACGCAGACTCTTGTTAAGAATGCTATTGTTCAGGTTGATGTTGCACCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAACATCACTATGGTGTTGAAATTGGAGGTTGAAGTCGCTGCTGAAGAAGCCAAGAAAAATAATCATGTGCAGAGGAAACTTGAGAACCGTCAAAAAGACCGTCAGCTAGATTCCCACATTGAAGAGCAGTTTGGTGGTGGTCGTTTGCTGGCCTGTATTTTATCTCATCCAGGTCAATGTGGCAGGCTTGATGGATACATCCTCGAAGGTAAGGAACCGAAATTTTACATGAAGAAGTTACAGAGGAAAAGGGAAATGGTGTTGCTTAATTGTAGTGTTTTCCATCTTATATATGACTTCATTTGTTTTTAA 666 0.4204 MTVKNSSYQGLNTFQSDNQRYELGRQLASTKLSSNKTIRRIRVRGGNVKWRDLRWDTGNFSWGSEAVTRKTRLLDMVYNASNNELVRTQTLVKNAIVQVDVAPFKQWYLQHYGVEIGRNITMVLKLEVEVAAEEAKKNNHVQRKLENRQKDRQLDSHIEEQFGGGRLLACILSHPGQCGRLDGYILEGKEPKFYMKKLQRKREMVLLNCSVFHLIYDFICF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01261 221 Gene3D - 23 112 - -
Car02g01261 221 Gene3D - 117 203 - -
Car02g01261 221 PANTHER 40S RIBOSOMAL PROTEIN S8 17 202 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car02g01261 221 TIGRFAM eS8: ribosomal protein eS8 16 188 IPR001047 GO:0003735|GO:0005840|GO:0006412
Car02g01261 221 Pfam Ribosomal protein S8e 17 186 IPR022309 -
Car02g01261 221 CDD Ribosomal_S8e_like 20 186 - -
Car02g01261 221 PANTHER 40S RIBOSOMAL PROTEIN S8 17 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01261 Car-Chr2 38026044 38027760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01261 19 195 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 77.401 1.53e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01261 K02995 - gmx:100500112 305.064