Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01256 ATGGATTGGTTCTGCGTTGATTCTCTTATATTGATGGTTCCTTGCAAACAAACCCTCGCTCACTGTCTTTCTAGAAGACCTTTCAGAACAAGCATGTTATATGATCATACACATTGCACATATCACAAAAATCTCAACACTCTTTTATCAACTCTCACTTCAAACACAGAAATCACCTACGGTTTCTACAATTTCACTTACGGCGAAGACAACGACAAAGTATACGCCATTGGATTATGTAGAGGAGATGTTAATCCACAAAACTGTATTAACTGTCTCAAAAATTCAACACTCCATCTCCAAGAAATCTGCACAAACAAAAAAGAAGCAATTGTTTGGATTGACAGATGCATGCTGCGTTACTCAAACAGATCAATATTTGGCCTAATGGAAACAGCACCAGGATTTTCTATGTTTAGTCCATTTAATGCAACAGATGTAGATAACTATAATAAAGTGTTGGGGAAATTGTTGTATAATTTGAGAACAGTAGCAGCTACAGGTGATTCTATGAGAAAATATGGAACAGCAAATGTAACAGGTCCAAATTTTCAGGATATATATAGTCTTATGCAGTGTACACCTGATTTACGTTATTTGGATTGTAATGAATGCTTGGAAAGTGCTATAGCTAGTCTTCCTTCATGTTGTGAAAATAAGATTGGTGGGAGAGTTATTAGACCAAGTTGTAATATTAGATATGAAAATTATAGGTTCTATGATCAACTTATAAATGTGGAACCAAAAGTACCTCCACCTAGTACTTCACCATCCACCAATCACACTTCCTCCAAAGGAAAAGGTCACACATCAAGAAGAGCCATGATGATAGCAATCCCAGTTGTTATTGTTATTTTGGTGCTCTGTTTTATTTGGATCTATTTACGACTACTTGCTAAGAAGCACACAAAAACTATTAAAATTCCTTCAGAAGATGATGATGATGAAATTACAACCTTAGAGTCTTTACAATTAAGCTTCGAAACGGTAAGAGTTGCTACAAATGATTTCGCAGATTCTAATAAACTTGGAGAAAGCGGATTTGGGGCTGTTTATAAGGTGAGATTATCTAATGGAAACATAATCGCTTTAAAAAGGTTGTCCATGAATTCTAGCCAAGGAGATATAGAATTTAAGAATGAAGTGCTTTTACTAGCCAAACTTCAACATAGAAATTTAGTTAGACTCCTTGGTTTTACGCTTGAAGGGAGAGAAAGACTACTTGTCTATGAATTTGTTCCCAATAAAAGTCTTGACTACTTCATATTCAATTGGGAAAAGCGCTACAAAATCATTACAGGTATTGCTCGAGGTGTTCTTTATCTTCACAAGGATTCTCAACTACGTATTATACATCGTGACCTCAAAGCAAACAACATTCTTTTAGATGAAGACATACAAACTAAGATATCAGATTTTGGCTTAGCAAGACTAATTTCTGAGGATCAAACACAAACTAATACAAGTAGAATTGTTGGAACCTA 1484 0.3511 MDWFCVDSLILMVPCKQTLAHCLSRRPFRTSMLYDHTHCTYHKNLNTLLSTLTSNTEITYGFYNFTYGEDNDKVYAIGLCRGDVNPQNCINCLKNSTLHLQEICTNKKEAIVWIDRCMLRYSNRSIFGLMETAPGFSMFSPFNATDVDNYNKVLGKLLYNLRTVAATGDSMRKYGTANVTGPNFQDIYSLMQCTPDLRYLDCNECLESAIASLPSCCENKIGGRVIRPSCNIRYENYRFYDQLINVEPKVPPPSTSPSTNHTSSKGKGHTSRRAMMIAIPVVIVILVLCFIWIYLRLLAKKHTKTIKIPSEDDDDEITTLESLQLSFETVRVATNDFADSNKLGESGFGAVYKVRLSNGNIIALKRLSMNSSQGDIEFKNEVLLLAKLQHRNLVRLLGFTLEGRERLLVYEFVPNKSLDYFIFNWEKRYKIITGIARGVLYLHKDSQLRIIHRDLKANNILLDEDIQTKISDFGLARLISEDQTQTNTSRIVGT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01256 494 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Car02g01256 494 MobiDBLite consensus disorder prediction 250 269 - -
Car02g01256 494 ProSiteProfiles Gnk2-homologous domain profile. 132 239 IPR002902 -
Car02g01256 494 SUPERFAMILY Protein kinase-like (PK-like) 319 494 IPR011009 -
Car02g01256 494 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 38 494 - -
Car02g01256 494 Gene3D Transferase(Phosphotransferase) domain 1 413 494 - -
Car02g01256 494 Gene3D - 30 125 IPR038408 -
Car02g01256 494 Gene3D - 135 239 IPR038408 -
Car02g01256 494 ProSiteProfiles Protein kinase domain profile. 337 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01256 494 Pfam Protein kinase domain 338 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g01256 494 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Car02g01256 494 Pfam Salt stress response/antifungal 144 237 IPR002902 -
Car02g01256 494 Pfam Salt stress response/antifungal 38 123 IPR002902 -
Car02g01256 494 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 494 - -
Car02g01256 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Car02g01256 494 SMART serkin_6 337 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01256 Car-Chr2 37840320 37845196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01256 40 494 Receptor kinase-like Gene Family AT4G05200 49.578 3.32e-143 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car02g01256 Pkinase 3.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01256 - - cam:101503576 868.996