Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01253 ATGGAAACTTTGAATGGTAATTCAGAACAATATGCAAATGTTTCTTCTAATTCTTCTtcatcgtcatcatcatcatcatcattatcatcatcatcattattatcatcatcatcatcTTTTGGAGGTGTTAATAGTGATGATAACAATGATAGTATAACATGGTATGGTATGAGGTTACCTTCTATTAACCCTTTACGTTCACCACTTTCATTTCTATTGGATTACTCTGGCATTCTACGTTCAACCAATGATTCTGAGGCTGTGATTCTCAACAATGAAGTTTCTGGTCATGGATCACGGTCTCGGGTTGATGATTCTGCTGGTTCTGTTGCTGGGAGCAGTGCAGGGGAAGTTGCAATAAGGATTATTGGAGCTGGAGAAAATATTCAAACTCAGGTTGGAGAAGTGGGTTatgatgattgtggtgatgatgtgattggtgagagaagtggaatgcctgcattggatgatgatgatgatACCGAGGGTCGTAGTGGAATTGCAGCTAGTGAAGGGGTTCCTCTTGTGTCTTCGTCTTCATCGTCGTCATTGGCTGGTAGTGGACAGGTTGATGGTGATGCGGCTGAGAATGGAACAGAAAATAGCAGTAGGGATTCGTCTTCCTATCAGAGATATGATATTCAGCTTGTTGCCAAGTGGATTGAGCAGATTCTTCCTTTTTCGCTCTTGTTGTTGGTTGTTTTCATCCGACAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATTGCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTGAAGGGAGATAGGAAAGTCTCTTTACTTGCTGGTATCTCTTTCGCTTTCATTCTTCACGTGATAGGCATTTACTGGTGGTATCGAAATGATGATGTTTTATATCCACTGATCATGTTACCTCCAAAACCAACACCTTTCTGGCATGCAATATTCACCATCTTGGTCAATGATATGTTGATGCGGCAAGTTGCAATGGCTTTTAAGTGTATCCTTCTTATATATTACAAAAAGGGGAAAGGTCATAACTTCCGTCGGCAGGCTCAAATGTTAACTCTTGTTGAGTACACGCTGCTGCTGTATCGTGCCTTGTTGCCAACACCAGTTTGGTACCGGTTTTTCTTGAATAGGGAATATGGCAGTCTCTTTTCGTCACTGACCACAGGGTTGTATTTAACTTTCAAGCTAACATCTGTTGTTGAGAAGGTCCAATACTTCATATCTGCCTTGAAAGCGTTATCAAGAAAGGACGTTCATTATGGGGTCTATGCCACAACAGAACAGGTTACTGCTGCTGGTGACCTATGTGCTATATGCCAGGAGAAGATGCATTCCCCTATCTTGTTGCGCTGTAAACACATTTTCTGTGAAGATTGTGTATCTGAGTGGTTTGAGAGAGAAAGGACTTGCCCCCTATGCAGAGCATTGGTTAAAGCAGCCGATCTTCGAACTTTTGGAGATGGATCAACAAGTTTGTTTTTCCAATTGTTTTAG 1509 0.3797 METLNGNSEQYANVSSNSSSSSSSSSSLSSSSLLSSSSSFGGVNSDDNNDSITWYGMRLPSINPLRSPLSFLLDYSGILRSTNDSEAVILNNEVSGHGSRSRVDDSAGSVAGSSAGEVAIRIIGAGENIQTQVGEVGYDDCGDDVIGERSGMPALDDDDDTEGRSGIAASEGVPLVSSSSSSSLAGSGQVDGDAAENGTENSSRDSSSYQRYDIQLVAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNEIVKKQTALKGDRKVSLLAGISFAFILHVIGIYWWYRNDDVLYPLIMLPPKPTPFWHAIFTILVNDMLMRQVAMAFKCILLIYYKKGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNREYGSLFSSLTTGLYLTFKLTSVVEKVQYFISALKALSRKDVHYGVYATTEQVTAAGDLCAICQEKMHSPILLRCKHIFCEDCVSEWFERERTCPLCRALVKAADLRTFGDGSTSLFFQLF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01253 502 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 419 489 IPR013083 -
Car02g01253 502 CDD RING-HC_RNFT1_like 440 479 - -
Car02g01253 502 ProSitePatterns Zinc finger RING-type signature. 456 465 IPR017907 -
Car02g01253 502 SUPERFAMILY RING/U-box 432 483 - -
Car02g01253 502 ProSiteProfiles Zinc finger RING-type profile. 441 479 IPR001841 -
Car02g01253 502 MobiDBLite consensus disorder prediction 147 165 - -
Car02g01253 502 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 22 502 - -
Car02g01253 502 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 22 502 IPR044235 GO:0061630|GO:1904294
Car02g01253 502 MobiDBLite consensus disorder prediction 172 206 - -
Car02g01253 502 Pfam Zinc finger, C3HC4 type (RING finger) 439 483 - -
Car02g01253 502 MobiDBLite consensus disorder prediction 1 41 - -
Car02g01253 502 SMART ring_2 441 478 IPR001841 -
Car02g01253 502 MobiDBLite consensus disorder prediction 147 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01253 Car-Chr2 37809634 37815425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01253 59 502 C3H Transcription Factor Family AT5G01960 63.453 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01253 - K22379 zju:107414042 579.711