Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01246 ATGGAAACACATCCAAACGCGGCCTCCATGCTAAGAAGCAGAAGCCTACCTTATTCTTCTTCTCGTCTTTCTAAACCATTGCTAGCTCTCAGTACGAGGATGCTGTCTCCCTCTTCTCCTTCTTCTTCAGCAACCGCTTCATCCGAAACAAGAAAAGGTTACCCTTCACTGAACCCTAAACCCTCATTCAGTAACCTTTCTCTATTCCCCCAAAATCCTCATCACACTCTTCAAACCATGACGATTTCTAACTGTTTCTCTCATTCTGGGCCCACTAACCCTATTCCGATTTCTGAATTGCACGAAGCTGATTCGGTCGACTCTCTCGTTGTGGTTTCGTTCTACAAGTTCGCTGATTTTCATGATCATGCTCTTTTGCGTCAACCACTGAAGCAACTTTGTCAACAATTGCGTGTTTCAGGCGGTATCATTCTTGCACCTGAAGGGATTAATGGCAGCATATGTGGCACACAGGAGTCGGTGGAGAAAGTCCTTGCATTTATTCAGAGTGATGATCGTCTAAAGGGGCTTAGACGTATTGAATCGCCTGTCACTCCCGAGGATGAGGCCATCCATCACGGTCAACATGGACATAGTGCCAGTTCTCCACTTGCTGCTGGTGAAGATGTTCCTTTCCGATGGGATCATGTGAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACTATATCGCCTATTGAAAGGGTTGGAAAATATGTTGGCCCTAATGAATGGAATTCTTTGATTAGCGATCCGGATACAGTAGTAATTGATGTGCGCAATAACTACGAAACCAGAATAGGAAAGTTTAAAGGTGCAGTGGATCCTTGTACCACATCGTTTCGAGAATTTCCGTCTTGGGTGGAGGAACGTTTCCAGCTTACCAGAACAGATGCTGATAATCCAAAAGGTGATGTAAACCATTCAGACCAAAGTGCTGAAAAAGAAACAGAGAATCCAAAACATTTGCCGCGTGTTGCTATGTATTGCACTGGGGGTATTCGATGTGAGAAAGCTTCAAGCCTACTTCTTAGCCAAGGTTTCAAAGAGGTTTATCACTTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGAGACAAAGCCTCTGGGAAGGAGAGTGCTTTGTTTTCGACAAGCGAGTCTCCGTGGAGCATGGTTTGGCACAAGGAAATTTCAAGCTGTGCTATGGTTGTAAACAGCCTGTGAGTGATGCCGACATGGAATCTCCAGAATATGAATATGGAGTCTCCTGTCCTAACTGTTTTGCTCAGAAGTCAGAAGAAGAGAAGGAGAGGGCTCGAGCTCGACAAAAACAGTTTGAGAGATGGGGGATTATAGGTGGTCCTGATAAGGGCCGCCGGCAACCGGACGGCCCTAGTAGAAATCAAAACCAACTTTCACAGTCAGTTTAA 1428 0.4517 METHPNAASMLRSRSLPYSSSRLSKPLLALSTRMLSPSSPSSSATASSETRKGYPSLNPKPSFSNLSLFPQNPHHTLQTMTISNCFSHSGPTNPIPISELHEADSVDSLVVVSFYKFADFHDHALLRQPLKQLCQQLRVSGGIILAPEGINGSICGTQESVEKVLAFIQSDDRLKGLRRIESPVTPEDEAIHHGQHGHSASSPLAAGEDVPFRWDHVRVKLKKEIVTLGMPTISPIERVGKYVGPNEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEERFQLTRTDADNPKGDVNHSDQSAEKETENPKHLPRVAMYCTGGIRCEKASSLLLSQGFKEVYHLEGGILKYLEEVPERQSLWEGECFVFDKRVSVEHGLAQGNFKLCYGCKQPVSDADMESPEYEYGVSCPNCFAQKSEEEKERARARQKQFERWGIIGGPDKGRRQPDGPSRNQNQLSQSV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01246 475 MobiDBLite consensus disorder prediction 1 20 - -
Car02g01246 475 MobiDBLite consensus disorder prediction 186 205 - -
Car02g01246 475 Pfam Rhodanese-like domain 249 366 IPR001763 -
Car02g01246 475 MobiDBLite consensus disorder prediction 301 322 - -
Car02g01246 475 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 107 457 IPR020936 -
Car02g01246 475 Gene3D - 227 408 IPR036873 -
Car02g01246 475 MobiDBLite consensus disorder prediction 434 475 - -
Car02g01246 475 Hamap tRNA uridine(34) hydroxylase [trhO]. 107 410 IPR020936 -
Car02g01246 475 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 107 457 - -
Car02g01246 475 ProSiteProfiles Rhodanese domain profile. 253 373 IPR001763 -
Car02g01246 475 Pfam UPF0176 acylphosphatase like domain 110 225 IPR040503 -
Car02g01246 475 Gene3D - 98 226 - -
Car02g01246 475 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 222 398 IPR036873 -
Car02g01246 475 CDD RHOD_YceA 240 366 - -
Car02g01246 475 SMART rhod_4 243 370 IPR001763 -
Car02g01246 475 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01246 Car-Chr2 37647664 37651661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01246 106 469 Sulfurtransferasese or Rhodanese AT2G40760 75.202 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01246 - - mtr:MTR_5g067730 775.007