Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01244 ATGGAAGATAATAATATCCTTCAAAGTGTAAAGAAGAGAGTGATAATCAAAGAGCTTGTTGAAGGCAAAGAAGCTGCAACAAAACTCAAGTATCTTCTTGAAAATGAGAATTCCTTTGGAAATCTCTCTTCAGACAAACTAGCTGCAAATGTGCTCAGTTCTTTCACAAAGGCCCTTTCTATTATCACTCAACACGGCGGTGAAAATGGGTCTCCGGTGGTGGTAGTCGCCGGCAATGATAGAAAGGGTGGGATACGTTGCTACAAAAGAAGGAAGAGTGCAGAGACATTGACCATGGTTTCCGGCACAACAACTGATATTCATTCATGGAGAAAGTATGGACAGAAGGAAATCATGAATTCAAAATTTACCAGGAGTTACTTCAGGTGCAAACATAAGCATGATGAAGGTTGTTCAGCAACCAAACAAGTGCAAAAAACACAAGACAATCCTAATATGTATCAAATTACATACATTGGCATTCACACATGCAACACCACTCCTAAGCCAACACAATTGAACAAAGATATTTCAAGTATTCCTCCATACGAAGCATGTCTTGTGAATTCTGGTATTCCTGACTTGAAAGTACCAATTAGTGAACAGGATCACCACATTACCTCACCAAGCCAAACTATAAATCAAGAATATCCCAAAGAAGAAACTCCTAATAATGTTACAGCACAAAAACATGAGTTTATGGAATATGATGAAAATGCAGATACTTTGTCAGTGTTTCAAAGTCTAGCACAGGAATTTGGGGACATTGACTTTCCTTTTTATGGAAATTAA 792 0.3788 MEDNNILQSVKKRVIIKELVEGKEAATKLKYLLENENSFGNLSSDKLAANVLSSFTKALSIITQHGGENGSPVVVVAGNDRKGGIRCYKRRKSAETLTMVSGTTTDIHSWRKYGQKEIMNSKFTRSYFRCKHKHDEGCSATKQVQKTQDNPNMYQITYIGIHTCNTTPKPTQLNKDISSIPPYEACLVNSGIPDLKVPISEQDHHITSPSQTINQEYPKEETPNNVTAQKHEFMEYDENADTLSVFQSLAQEFGDIDFPFYGN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01244 263 Pfam WRKY DNA -binding domain 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01244 263 Gene3D WRKY domain 88 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01244 263 SMART WRKY_cls 104 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01244 263 ProSiteProfiles WRKY domain profile. 105 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01244 263 SUPERFAMILY WRKY DNA-binding domain 102 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01244 263 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 7 233 - -
Car02g01244 263 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 233 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01244 Car-Chr2 37628069 37631930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01244 10 219 WRKY Transcription Factor Family AT3G56400 36.250 6.41e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car02g01244 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01244 - - cam:101503258 537.724