Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01243 ATGGAAGAGGTCTTGAATTTCATCATGCATGCTATTGAATCGTCAAAAAAACTTGAACTTGAACTACCCAACATAATCAACCACCTTGAAATTCTATTCTCATCCATTGATGAAGTAGAAAAATCATTTGGTGGTGCAAAAGAAAGGGTCATGATGTTGTTGTCATCACAACATGACATAACAAAAACAACACTTTCTAATTCATTTGCTTCAATGATGTCTCATGATGTTTTCATGAACAAAACTCAACATGCTCAAATAGATCGTTTGCTTGATTTAATGCAAAACCCTTTTGATATGAGTCATGTTTTGCTTGAGAATAAGATGATAAGTGGTGGTGATATTCCAATGTTAAGGTCAAAGGGAACATTGAAGATTGGTGAAATGGTTGGGAGGAATGTGGAAGGTTTAGAAAAATCAAAAGGGTTAGAAGGAGAAATGCAAGGAATACAAACACCACCCTCAAGGCCAAAAAAAAGTGGCAGCAGGAAGATTGATTTGGAGAAGAGAACAGTGATGGTTCCAGCACCACAGGTTGGAAATACAGACATGCCACCAGAAGATGGCTTCACTTGGAGAAAATATGGCCAAAAAGAGATACTTGGCCGCAAGTACCCAAGGAGTTACTATAGGTGCACACATCAAAAATTATATTTGTGTCCTGCAAAAAAGCAAGTACAAAGAGTTGATGAGAATCCTAACATAGTTGAAGTAACATATAGAGGTGACCATATTTGTCACAAATCCTTAACAGCACCATTATCATATCCACCACCACAACAACTACTTGTGAACATTAACAATACTCAAACCACCATTTCTCCCCAATTGTCTCCATCATCAAATTCAAGGTGGCCTCAAGCGGCGAACCTCGGCCTCAGGGCCGGTGATGCCAGCGGTAGTGGTGGACCGTCTACTACAAGATATGGCATTGATTATCCGGTAGCCGATATGGCGGATACAATGTTCAACTCAGGTAGTAGTAGTGGTAATAGTATGGAATCACTCTTTGCTCCAATGGATGATAAATGGGAACTTGATGAGAATAAAAGTTGA 1056 0.392 MEEVLNFIMHAIESSKKLELELPNIINHLEILFSSIDEVEKSFGGAKERVMMLLSSQHDITKTTLSNSFASMMSHDVFMNKTQHAQIDRLLDLMQNPFDMSHVLLENKMISGGDIPMLRSKGTLKIGEMVGRNVEGLEKSKGLEGEMQGIQTPPSRPKKSGSRKIDLEKRTVMVPAPQVGNTDMPPEDGFTWRKYGQKEILGRKYPRSYYRCTHQKLYLCPAKKQVQRVDENPNIVEVTYRGDHICHKSLTAPLSYPPPQQLLVNINNTQTTISPQLSPSSNSRWPQAANLGLRAGDASGSGGPSTTRYGIDYPVADMADTMFNSGSSSGNSMESLFAPMDDKWELDENKS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01243 351 MobiDBLite consensus disorder prediction 139 164 - -
Car02g01243 351 Gene3D WRKY domain 175 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01243 351 ProSiteProfiles WRKY domain profile. 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01243 351 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 276 IPR044810 GO:0003700
Car02g01243 351 Pfam WRKY DNA -binding domain 187 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car02g01243 351 SUPERFAMILY WRKY DNA-binding domain 184 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car02g01243 351 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 276 - -
Car02g01243 351 SMART WRKY_cls 186 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01243 Car-Chr2 37612078 37615820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01243 1 342 WRKY Transcription Factor Family AT2G40740 34.870 2.91e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car02g01243 WRKY 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01243 - - mtr:MTR_5g067680 473.011