Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01239 ATGCCGAACCCCGAACCAAATCCTCACCGGTCCAAAAACAAACCCTCCACGTCATCATCTAGACCACCACCGGTTCGACCCCCGGTTCGTTCTCGAGTTCCGTTGAAACAGTTACTCCGTGTAGCATCCGTAGCAAGCGGTATTCAATTCGGTTGGGCTTTACAGCTTTCACTATTAACACCCTACGTTCAGCAATTAGGAATCCCTCATCAATGGGCCAGTATTATCTGGCTTTGCGGCCCAGTTTCCGGCCTGTTTGTTCAGCCTTTAGTCGGTCTTTTAAGTGACCGTTGCCAAAGCCGATTCGGTCGACGGAGACCGTTTATATTAGTCGGCGCTGCTTCGATTGTCGTCGCCGTTGTTATAATCGGTTACGCCGCTGATATTGGTGGTTTACTTGGTGATGATATTACAGGGAGTTATCGTCCGTTTGCTATAATTGTTTTTGTCATAGGGTTTTGGATTCTTGATGTTGCTAATAATGTTACTCAAGGTCCTTGTAGAGCTTTACTCGCTGATCTCACTTGCAATGATGCTCGGAGGACACGTGTTGCAAATGCTTACTTCTCCCTGTTTATGGCCATTGGTAACATTCTTGGCTATGCAACTGGGGCATACAGTGGTTGGTACAAGATTTTTACTTTCACACTTACCCCTGCATGCTCTATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACGTTGCTTTCATTGCGGTCACAACATATCTCAGCCTTGTGTCTGCTCATGAAGTGCCTCTAAGTTCAAGTGGGGCAGTGCATGCCGGAGAAGGGACAGGTAGTGCGGAAGAAGCTTTCATGTGGGAATTGTTTGGGACATTTAAATATTTTTCATTCCCTATATGGATTGTACTGTCTGTAACTGCTCTGACATGGATTGGGTGGTTCCCGTTTATTCTCTTTGATACTGATTGGATGGGTCGAGAAATTTATGGTGGTGATCCAAATGGAGGCCTTATTTATGATACTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGGAGTAACATCATTGCTTATGGAAAGGCTATGCAGGAAGCGGGGGGCTGGTTTTGTGTGGGGAATCTCAAATATCTTGATGACTATTTGCTTTCTTGCAATGTTAGTGTTAACCTATGTGGCAAATAGCATTGGCTATGTAGGTAAAGGTCTACCACCACCAACAGGCATTGTGGTCGCAGCGATAGCAATCTTTACCATTCTTGGCTTTCCACTGGCAATAACTTACAGTGTTCCATATGCCTTGATTTCAACGCATATCGAACCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCAATAGTGGTTCCACAGATTGTGGTGTCCTTGGGAAGTGGACCGTGGGATCAGATTTTTGGTGGAGGAAATTCTCCAGCCTTTGCCGTGGCAGCTGTTGCAGCCCTTATGAGTGGGCTCTTAGCTTTATTAGCTATTCCACGAACTGGGACCCAAAAGCCTCGAAGCCGT 1521 0.4576 MPNPEPNPHRSKNKPSTSSSRPPPVRPPVRSRVPLKQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGLLSDRCQSRFGRRRPFILVGAASIVVAVVIIGYAADIGGLLGDDITGSYRPFAIIVFVIGFWILDVANNVTQGPCRALLADLTCNDARRTRVANAYFSLFMAIGNILGYATGAYSGWYKIFTFTLTPACSISCANLKSAFFLDVAFIAVTTYLSLVSAHEVPLSSSGAVHAGEGTGSAEEAFMWELFGTFKYFSFPIWIVLSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGLIYDTGVRMGALGLLLNSVVLGVTSLLMERLCRKRGAGFVWGISNILMTICFLAMLVLTYVANSIGYVGKGLPPPTGIVVAAIAIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIVVSLGSGPWDQIFGGGNSPAFAVAAVAALMSGLLALLAIPRTGTQKPRSR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01239 507 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 8 506 - -
Car02g01239 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 499 IPR005989 GO:0005887|GO:0008515|GO:0015770
Car02g01239 507 MobiDBLite consensus disorder prediction 1 30 - -
Car02g01239 507 SUPERFAMILY MFS general substrate transporter 38 500 IPR036259 -
Car02g01239 507 Gene3D MFS general substrate transporter like domains 35 496 IPR036259 -
Car02g01239 507 PANTHER SUGAR TRANSPORTER 8 506 - -
Car02g01239 507 CDD MFS_SLC45_SUC 38 494 - -
Car02g01239 507 Pfam MFS/sugar transport protein 53 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01239 Car-Chr2 37529859 37542488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01239 14 504 Sucrose Transporter Gene Family AT1G09960 70.468 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01239 K15378 - gmx:100820483 778.859