Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01234 ATTTACAaatgtagttgttattgctaatgttactgttgctgttgatgGGAGTGGGAACTATACTTCGGTGAAGGAAGCGGTACTTGCAGCACCTGACAATAGCATGAAACGCTATGTGATATTTGTAATGAAACGCTATGTGATATTTGTAAAGAAGGGTGTCTACATAGAGAATGTATTTATTAATGAAACCAAGGTGAACATCACAATAATTGGAGAAGGTATGGATGCTACTATCATCTCTGGTAATTTGAGTCAACGCCAAAATAACTTAAGTTCATACGACACTCCTACCTTTGATGTTAGAGGTGTAGGGTTCATGGCACAAGACATTTCCTTCAAGAACACTGCTGGACCCGAAAATGAGCAAGCAGTGGCTCTACGCTCAGACTCTGACTTCTCTGTTTTCTATAGATGTGGAATCTTTGGTTATCAAGACAGATTACTTGCCAACATCAATCGCCAATTTTATAGAGAATGTTAA 484 0.3574 FTNVVVIANVTVAVDGSGNYTSVKEAVLAAPDNSMKRYVIFVMKRYVIFVKKGVYIENVFINETKVNITIIGEGMDATIISGNLSQRQNNLSSYDTPTFDVRGVGFMAQDISFKNTAGPENEQAVALRSDSDFSVFYRCGIFGYQDRLLANINRQFYREC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01234 160 PANTHER PECTINESTERASE 8 160 - -
Car02g01234 160 SUPERFAMILY Pectin lyase-like 8 160 IPR011050 -
Car02g01234 160 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED 8 160 - -
Car02g01234 160 Pfam Pectinesterase 9 160 IPR000070 GO:0030599|GO:0042545
Car02g01234 160 Gene3D - 4 160 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01234 Car-Chr2 37415391 37416404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01234 2 160 Carbohydrate Esterase AT3G43270 52.201 1.56e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01234 K01051 - gmx:100810815 183.726