Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01233 ATGGCAGCCGTATTCAACCACGGTTTTCATGCAAACTTATATGAGCGAGTTGTTATTGCTAATGTTACTGTTGCTGTTGATGGGAGTGGGAACTATACTTCGGTGAAGGAAGCGGTACTTGCAGCACCTGACAATAGCATGAAACGCTATGTGATATTTGTAATGAAACGCTATGTGATATTTGTAAAGAAGGGTGTCTACATAGAGAATGTATTTATTAATGAAACCAAGGTGAACATCACAATAATTGGAGAAGATGTTAGAGGTGTAGGGTTCATGGCACAAGACATTTCCTTCAGGAACACTGCTGGACCCGAAAATGAGCAAGCAGTGGCTCTAGGCTCAGACTTTGACTTCTCTGTTTTCTATAGATGTGGAATCTTTGGTTATCAAGACAGTTTACTTGCCAACATCAATCGCCAATTTTATAGAGAATGTAAAATTAGTGGAACTATAGACTTCATATTTGGGTATGCTAAAGTAGTGTTTCAAAGCTGCCAAATACTTGTAAAAAAAGGATTGCATGGACAACATAACACAATCACAGCTCAAGGAGGACTATACAAAGGATTACCAACTGCATTCTCATTTCAATTTTGTAATATATATGCCGATATTGACCTCCTGCCATATCTTAATTCTACCTCAACCTTCCTTGGCAGACCATGGCAGCCGTATTCAACCACGGTTTTCATGCAAACTTATATGAGCCAGGTATTGAGTCCTAAAGGGTGGCTAGAATGGAATTCATCTCAATATTTTGATACATTGTATTATACAGAGTATAACAATTATGGTCGTGGAGCTAATCTACAAAATCGAGTGAAATGGTCAGGCTTTCACGTGTTAAATGATTCTAATCAGGCTACTAATTTCACTGTGTCTACATTAATTTTAGGGGATCAATGA 909 0.3806 MAAVFNHGFHANLYERVVIANVTVAVDGSGNYTSVKEAVLAAPDNSMKRYVIFVMKRYVIFVKKGVYIENVFINETKVNITIIGEDVRGVGFMAQDISFRNTAGPENEQAVALGSDFDFSVFYRCGIFGYQDSLLANINRQFYRECKISGTIDFIFGYAKVVFQSCQILVKKGLHGQHNTITAQGGLYKGLPTAFSFQFCNIYADIDLLPYLNSTSTFLGRPWQPYSTTVFMQTYMSQVLSPKGWLEWNSSQYFDTLYYTEYNNYGRGANLQNRVKWSGFHVLNDSNQATNFTVSTLILGDQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01233 302 ProSitePatterns Pectinesterase signature 2. 148 157 IPR033131 -
Car02g01233 302 SUPERFAMILY Pectin lyase-like 20 301 IPR011050 -
Car02g01233 302 PANTHER PECTINESTERASE 87 301 - -
Car02g01233 302 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 87 301 - -
Car02g01233 302 Pfam Pectinesterase 21 85 IPR000070 GO:0030599|GO:0042545
Car02g01233 302 Pfam Pectinesterase 87 301 IPR000070 GO:0030599|GO:0042545
Car02g01233 302 PANTHER PECTINESTERASE 17 85 - -
Car02g01233 302 Gene3D - 17 302 IPR012334 -
Car02g01233 302 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 17 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01233 Car-Chr2 37411442 37415166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01233 15 301 Carbohydrate Esterase AT3G43270 53.205 7.28e-111 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01233 K01051 - gmx:100798620 369.777