Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01228 ATGGAGCATCATTCCTTCTCTTCCCATCCAAATTCAGGCAATTCCTCCCCTCAATCTCGCGAATTGCTCGACAATGACAATCGTTCATCATTCGATGAACTGCCGTTATCTTCCAACGGTTACAAAGTCAAGCTCATGATCAGCTACGGTGGAAAAATCCAACCTAGGTCACACGACAATCACTTTTCATACATCGGCGGCGACACCAAAATCCTCGCCGTAGATCGCACTGTCAAATTATCCACTCTCATTGTTAAGCTCTCATCAATGGCGAATTCCGACGTCTGCTTCAAATACCAACTCCCCGGTGAAGATCTTGATGCTTTGATCTCAGTTACCAATGAAGAAGATCTCGATCAAATGATGATCGAGTACGATCGTCTCTTTCGCGCTTCACCTAAACCAGCGAGGATGAGGCTCTTCATTTTTCCAATCCCTAACAAAAATGCAAATGCATCTTCTGGTTCTTCCGCCTCTGCGATCAATCTCACTGCCGCGGAGGACTCCAAATCGGAAGGTAATTGGTTCGTTGAAGCTCTCAATTCCGTTCACGTTCAGCCGTTGGAAGATTCTTCTCCGCCGCCAACTACGAATCCGGATTACCTGTTTGGATTAGATAAGCCGTACTCCGCGGCAAATCAGGCGGAATTCCCGGCGACGGTTCCGGATTTCGCGGCGAAAGACATGGAATGTGGGCCCGAGACGGTTAGAGAAACCGAGATTCATGAAGTGCAGGCTGCGAATAATGAACAGCAAATGAAAAGTGACGGAGAAAAAGGAAGAATTAACGGCGATGTTGACTGTTACACTACGGAAAAAGTGACGCCGTTAGTTACTAATGTACCTGCTCATCATACTCAAGTTCAACTTCAttccggttcgattccggttcatgctcgtggaccggttccggttcatgtttctggaccggttcatgtttctggaccggttccggttcatgtttctggaccggttccggttcAGTCATCGCTTTCACCAGAAAGGTATAATGTGGCTAGTGGTTACTCGATGGGGTATCCAAATGAAGTGTCACCGGTTTATCTGATCCAAACAGCTTCAGGATTCTACCAAGCAGTGAGGCCAGTAACCGGACCTACCGGTCAACCTGTTTATTTCGCATATTCACCAATTGTGAACAATGTTGCTTACAGTAATGGTTCAGATTTACCTGATGTGGTTTCCGAGCGTAGATATTCGTATTTCCCTGACAGGTCAGCATTGCCACGGCAGGCGGCGGCACCGGGTGGTGACGGCTGGAATTGA 1284 0.4299 MEHHSFSSHPNSGNSSPQSRELLDNDNRSSFDELPLSSNGYKVKLMISYGGKIQPRSHDNHFSYIGGDTKILAVDRTVKLSTLIVKLSSMANSDVCFKYQLPGEDLDALISVTNEEDLDQMMIEYDRLFRASPKPARMRLFIFPIPNKNANASSGSSASAINLTAAEDSKSEGNWFVEALNSVHVQPLEDSSPPPTTNPDYLFGLDKPYSAANQAEFPATVPDFAAKDMECGPETVRETEIHEVQAANNEQQMKSDGEKGRINGDVDCYTTEKVTPLVTNVPAHHTQVQLHSGSIPVHARGPVPVHVSGPVHVSGPVPVHVSGPVPVQSSLSPERYNVASGYSMGYPNEVSPVYLIQTASGFYQAVRPVTGPTGQPVYFAYSPIVNNVAYSNGSDLPDVVSERRYSYFPDRSALPRQAAAPGGDGWN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01228 427 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 391 - -
Car02g01228 427 Gene3D - 63 143 - -
Car02g01228 427 CDD PB1_UP2 46 143 - -
Car02g01228 427 Pfam PB1 domain 60 144 IPR000270 GO:0005515
Car02g01228 427 PANTHER OS05G0427100 PROTEIN-RELATED 1 391 - -
Car02g01228 427 MobiDBLite consensus disorder prediction 7 29 - -
Car02g01228 427 SMART PB1_new 57 145 IPR000270 GO:0005515
Car02g01228 427 MobiDBLite consensus disorder prediction 1 29 - -
Car02g01228 427 SUPERFAMILY CAD & PB1 domains 58 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01228 Car-Chr2 37136164 37137926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01228 26 221 MAP Kinase Kinase Kinase AT3G46920 35.678 6.91e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01228 - - cam:101512371 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01228 02 37136164 37137926 Car02g01228 02 37136164 37137926 ECH