Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01205 ATGACCGAACAAGATCAACAAAACAACACGTGTTTTTTCACCGCAACCAACACCGGTTTTCTTCTTGACCCTGCAAAATGTGGTGTGCTGAATTTCCAAGACAAGCGAAGACTGGTCCATGAGGTTGCTCGTCAGTCCAAAGATGCCCCAACTATACTTCAATCATTTACTCGCAGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACCGGATATACCAAGGGTCAAATGATAGAATACCTTCTGAAGTTAATTTCTAAGAAATCCAACTTCCACGTTGACCAAAATGCTCTTGCTCATTCTCCTGCCAAAAGTTGTGTAGGATCTAAAAGGAAAAAAGGACCTCCATCTCCGGATGTACATAATGTTCATCTAGAGACCACGGATGAGGAAACAGTGAAAACCTTAGTGTGTCGCAATGTTGCATGCAAAGCTACGCTGAATCCAGAAGATTCGTTTTGCAAGAGATGCTCTTGTTGTATATGTCGTTGCTACGATGATAACAAGGATCCCAGTTTGTGGTTGACCTGCAGTTCCGATCATCCCAATGAAGAGTCATGCGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGAAGTCGCAGTATAACCTTGGATGGAAGCTTCTATTGTGTTTCTTGTGGAAAAATTAATGAATTAATGAGGACATGGAGAAAGCAATTATTGGTGGCCAAAGAAGCAAGAAGAGTGGATATACTATCTTTGCGAGTATCCTTGGCCCACAGAATTCTCAGTGGAACAGAAGTCTACAAGGAAGTGCAAAAGATTGTAGAAACTGCTCTAAAATTACTGGAGAATGAAGTGGGGCCTCTGGATCATGTATATGCTAGGATGACGCGCGGAATTGTGAGCAGACTCACATGCGGTACTGAGGTTCAGAAGTTGTGCTCTACTGCAGTAGAATGTTTTGATTTAAAGTTTTCTGAACTCTTTTCTAGTTCTGTAGAAAAGAAAGAAGCACCAACATGTTCTTTACGGTTTGAAGAGTGCCTTCCTACCTCAGTGGTCATTGGGCTAGAATACGAAGACAAACTCTTAAAGAACTTCCTAGGCTGCAGGCTTTGGCACAGAATATCGACAATGGACTACCCAGAACAACCGACTTTCATTGTTTTGCGGCCCGAGAAAAGGTTCAAGTTAGAAAACCTCCATCCCTCAACTGAGTACTCATGCAAGGCTTCTATATTCAGCAGCACAGGGATTTTGGGTGCAGCAGAAGCTAAATGGGTGACACCTTGTGAACCACCTTCAAAGGTTATTAGACATGGCCTGAACCGTTCAACTCTCAACATATATCCACAAGACCAAATTAAGATAGCTGTTGAAAATTATCGGGGTGAATCTACCAACTCCCGTGTAAACTTATCACCAAGAAACCTTCCTGAAAAACACATTCTTTTAAACATCAGAGACAAATTTGAAGATTTCCTCACCAAGCCTCCAACAATAGAACCTTTTTCGTATAAAAGTTTTGCAGCGGATTCGCCTGTCACGCCTTCTAAACCCAATGAAATGAGACAAATTACTGGTTTGAGTTCTAGAAAGCGTGTGAAGGAAAACGATTACGAGTATTCTGTGAGGGTAGTTAAATTGTTAGAGCATCAAGGGCACATAGATGAAATCTTCAGAGTGAAGTTTCTGACTTGGTTCAGTCTCAAGGCTAATCAGCANNNNNNNNNNNNNNNNNNNATGCACTGA 1761 0.4128 MTEQDQQNNTCFFTATNTGFLLDPAKCGVLNFQDKRRLVHEVARQSKDAPTILQSFTRRELLELICAELGKERKYTGYTKGQMIEYLLKLISKKSNFHVDQNALAHSPAKSCVGSKRKKGPPSPDVHNVHLETTDEETVKTLVCRNVACKATLNPEDSFCKRCSCCICRCYDDNKDPSLWLTCSSDHPNEESCGMSCHLQCALSNQMSGILKGSRSITLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDILSLRVSLAHRILSGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLTCGTEVQKLCSTAVECFDLKFSELFSSSVEKKEAPTCSLRFEECLPTSVVIGLEYEDKLLKNFLGCRLWHRISTMDYPEQPTFIVLRPEKRFKLENLHPSTEYSCKASIFSSTGILGAAEAKWVTPCEPPSKVIRHGLNRSTLNIYPQDQIKIAVENYRGESTNSRVNLSPRNLPEKHILLNIRDKFEDFLTKPPTIEPFSYKSFAADSPVTPSKPNEMRQITGLSSRKRVKENDYEYSVRVVKLLEHQGHIDEIFRVKFLTWFSLKANQXXXXXXXMH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01205 586 Pfam PHD - plant homeodomain finger protein 144 263 IPR032881 -
Car02g01205 586 PANTHER OS08G0220600 PROTEIN 13 577 - -
Car02g01205 586 CDD PHD_VIN3_plant 164 228 - -
Car02g01205 586 PANTHER VIN3-LIKE PROTEIN 2-RELATED 13 577 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01205 Car-Chr2 36436839 36442734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01205 22 575 PHD Gene Family AT5G57380 32.988 6.08e-90 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01205 - - gmx:100785502 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01205 02 36436839 36442734 Car02g01205 02 36436839 36442734 ECH